Query= MSMg01no263_p23.b1 MSMg01no263_p23.b1 CHROMAT_FILE:
MSMg01no263_p23.b1 PHD_FILE: MSMg01no263_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:04 2005
(375 letters)
>mm_chr9_66546589_66547363
Length = 775
Score = 688 bits (356), Expect = 0.0
Identities = 368/372 (98%)
Strand = Plus / Plus
Query: 4 ggaattcttgttgacatctttgcccttgagaaattcaaagtgatgcttgatcagatctaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttgttgacatctttgcccttgagaaattcaaagtgatgcttgatcagatctaa 263
Query: 64 aatccaacgcatcatcctccaattttgcatgtctgaatctgacctgtgaagaggggtgaa 123
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aatccaacgcatcatccttaaattttgcatgtctgaatctgacctgtgaagaggggtgaa 323
Query: 124 tgacagtaactgcaagaacttggggaccaggatcctagagtcaggtttgactatgtttcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgacagtaactgcaagaacttggggaccaggatcctagagtcaggtttgactatgtttcc 383
Query: 184 tgcgggggaaataacaagtcaggtctcactgtgtaacaaaccagcctgtatctcagtggt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgcgggggaaataacaagtcaggtctcactgtgtaacaaaccagcctgtatctcagtggt 443
Query: 244 ttcaagtaacaagcattgtcactaacagttctgatccagtctggagaggcacatctctgt 303
| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 444 tccaagtaacaagcattgtcactaacagttctgatccaggctggagaggcacatctctgt 503
Query: 304 ttagctggtggcctcactcctgtccctttgccctgactgctgactgtctgtggagactta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttagctggtggcctcactcctgtccctttgccctgactgctgactgtctgtggagactta 563
Query: 364 gttgagatggtg 375
||||||||||||
Sbjct: 564 gttgagatggtg 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no263_p23.g1 MSMg01no263_p23.g1 CHROMAT_FILE:
MSMg01no263_p23.g1 PHD_FILE: MSMg01no263_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:04 2005
(625 letters)
>mm_chr9_66711072_66712093
Length = 1022
Score = 1123 bits (581), Expect = 0.0
Identities = 613/625 (98%), Gaps = 3/625 (0%)
Strand = Plus / Minus
Query: 1 caaaatgtggccagggctaaaaagcattttagccatttcagttctaggccgtaactctca 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 822 caaaatgtggccagggctaaaaagcattttagccatttcagttctaggcagtaactctca 763
Query: 61 gggaacattaattgagatgtatatggagtccctgctaactgtataaaatagaatcagctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 gggaacattaattgagatgtatatggagtccctgctaactgtataaaatagaatcagctt 703
Query: 121 tccctctctggacatcaaatgggcagagtctcattttctttttcctaagtgggcaggttc 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 tccctccctggacatcaaatgggcagagtctcattttctttttcctaagtgggcaggttc 643
Query: 181 taacaaaataaatgaagggaggggaagaaaattgttttaaagagtctctacagtcttctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 taacaaaataaatgaagggaggggaagaaaattgttttaaagagtctctacagtcttctg 583
Query: 241 tagggaaggttggggcactaggactgaaaatattgtgtgtatgtatttcatgaaggagaa 300
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 582 tagggaaggttggggcactaggactgaaaatattgtgtgtatgtatttcaggaaggagaa 523
Query: 301 aatatgttatgttctcagtccttctgaattatgtaactctgaaccacgcggtccatttgt 360
||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||
Sbjct: 522 aatatgttatgttctcagtccttctgaattatgtaactctgaaggatgtggtccatttgt 463
Query: 361 gcccaaataatgaggcctgtaatcctgcacttcacatgtgtgggaatgctttgcagagtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gcccaaataatgaggcctgtaatcctgcacttcacatgtgtgggaatgctttgcagagtg 403
Query: 421 actagcattcctttctccagcctgcattcagaggaaacatgccattcacaccctctgtgc 480
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 402 actagcattcctttctccagcctgaattcagaggaaacatgccattcacaccctctgtgc 343
Query: 481 gctcacattttccagtgcgttggagagcttttttttttttttttcaatagaaatctttgt 540
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 342 gctcacattttccagtgcgttggagagc---tttttttttttttcaatagaaatctttgt 286
Query: 541 tccctccctaataagacttgggttgaatttaaggaacttagcatatccttttttgttttc 600
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tccctccctaataagacttggattgaatttaaggaacttagcatatccttttttgttttc 226
Query: 601 tggcaggaattgattttaaaatcag 625
|||||||||||||||||||||||||
Sbjct: 225 tggcaggaattgattttaaaatcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1022
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1012
Effective search space: 622380
Effective search space used: 622380
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
