TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAATTTAAATACACTTGGGCAGTATGGGAAAGTCACTTGGTCATTA
TGAGACTATGGATAACACATGCCCCAGCCTAGATGCTGACTGGGCTCTTC
CTTTCATCATGTTTCTTTATGAATGTCACTTCCAATTTTCCATACTAGCT
TTCTCCATGAGGCCAGATCCATGGCCACAGGCTCTGCCAATGCTGTGTCT
TCTTATCTTCCCCACCAGACTTTAAGAGAATCTCTTCCCTTAAATTAATT
TCCAAAGGCCCCAAAGAAAGATTCTGATTGGCTTGGCTTGGGTCACATCA
TCAACTCTGTGGTCCTGAGCATTCAAAAGCATAGTCAGCCAGGGGTGGAG
TTTCTAAATAGTCCCATCAGAGAAGCAAAAAGTACTGTAGAAAAAAACCA
AACAAACAAAGAAACCCCACTTACATATGAAGAAGAAGAGTTTGTTTACT
GAATGACATATTCTCGTTAAGATGGAAAAAATTACTACCAATAAAGAAAA
TGTTTTATACTAGCCAGTTCTTTTCTTTCCTATAGTTAACCCCATTATAA
GAATGAAACACTTTGTTATTTTAGATAATAAAAACTCAAGTCAGTAACTT
CCAAGGTACCATCACACTGAATTGTGATTTCCTATACAGAAGACTGTCTT
CCTATGACTGTTGAGCTCTTTAATCTCAAAAACCAATTCTGAGGCCA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTCTGTACACACTTTTCTTCTAT
TAAAGATGAAAGCAAGTTGCATGCTAATGAAATAGATGTGCCTGTTTATT
TTTGCCTAAAGAATTAAATCATGGTTGAATATTTGATGCTACAGGGTATA
GATTGTCTTACATTGTTTTTCAAAGTTGATCAATAATTTTATTTAAAACT
GTCAATGTTGAGGATATTCTTTTGCACAAACACATAGTATAAAATGATGA
AAGCACCAATTAGGGGTATTTTAGAAATTGTTGGAAATTCCATCTTAATC
TCAAGCCAAAATATATTTATTGAGTTTTACACCAACACTCAGGTCAGCAA
CTCAAACAAGCAATCTCTCAAATCAAATATTCTAACACAGTATAATCCAA
AGACATATTAATTTGATACTGAGTGCTAAGAAATGATAGTAAAAAATATT
TTAAATCTTTGTTTTCCATAATTAAACCATTTTGTTTCTATAAGAGCAGA
AAACATCATTTACAGTAAAAACACCATAATTAATAATGTTCAATAGCCTG
GAATCTGATCTGGTCTGAGAAACTCTTCATGTTATGTGACACAGTGCAAA
GTGTACATCCTGAGTGTCAGAATCTCAGGTTTTAGTAATGCCCCATAATA
TCACGTAGATATTATTCTGGACACACTTCAGGTTCATAATGGATN

Query= MSMg01no265_e02.b1 MSMg01no265_e02.b1 CHROMAT_FILE:
MSMg01no265_e02.b1 PHD_FILE: MSMg01no265_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:41 2005
         (521 letters)



>mm_chr9_34070447_34071366
          Length = 920

 Score =  891 bits (461), Expect = 0.0
 Identities = 490/507 (96%), Gaps = 13/507 (2%)
 Strand = Plus / Minus

                                                                       
Query: 27  ggcagtatgggaaagtcacttggtcattatgagactatggataacacatgccccagccta 86
           |||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||
Sbjct: 920 ggcagtatgggaaagtcacttggtcattttgagactatggataacacatgccaaagccta 861

                                                                       
Query: 87  gatgctgactgggctcttcctttcatcatgtttctttatgaatgtcacttccaattttcc 146
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 gatgctgactgggctcttcctttcatcatgtttctttatgaatgtcacttccaattttcc 801

                                                                       
Query: 147 atactagctttctccatgaggccagatccatggccacaggctctgccaatgctgtgtctt 206
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 atactagctttctccatgaggccagatccatggccacaggctctgccaatgctgtgtctt 741

                                                                       
Query: 207 cttatcttccccaccagactttaagagaatctcttcccttaaattaatttccaaaggccc 266
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 cttatcttccccaccagactttaagagaatctcttcccttaaattaatttccaaaggccc 681

                                                                       
Query: 267 caaagaaagattctgattggcttggcttgggtcacatcatcaactctgtggtcctgagca 326
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 680 caaagaaagattctgattggcttggcttgggtcacatcatcaactctgtggccctgagca 621

                                                                       
Query: 327 ttcaaaagcatagtcagccaggggtggagtttctaaatagtcccatcagagaagcaaaaa 386
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttcaaaagcatagtcagccaggggtggagtttctaaatagtcccatcagagaagcaaaaa 561

                                                                       
Query: 387 gtactgtagaaaaaaaccaaacaaacaaagaaaccccact------------tacatatg 434
           |||||||||||||||| |||||||||||||||||||||||            ||||||||
Sbjct: 560 gtactgtagaaaaaaa-caaacaaacaaagaaaccccacttaccctccgttgtacatatg 502

                                                                       
Query: 435 aagaagaagagtttgtttactgaatgacatattctcgttaagatggaaaaaattactacc 494
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagaagaagagtttgtttactgaatgacatattctcgttaagatggaaaaaattactacc 442

                                      
Query: 495 aataaagaaaatgttttatactagcca 521
           |||||||||||||||||||||||||||
Sbjct: 441 aataaagaaaatgttttatactagcca 415


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 920
Length adjustment: 10
Effective length of query: 511
Effective length of database: 910
Effective search space:   465010
Effective search space used:   465010
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)