Query= MSMg01no265_o14.b1 MSMg01no265_o14.b1 CHROMAT_FILE:
MSMg01no265_o14.b1 PHD_FILE: MSMg01no265_o14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:33 2005
(323 letters)
>mm_chr9_25789565_25790286
Length = 722
Score = 588 bits (304), Expect = e-172
Identities = 313/316 (99%), Gaps = 1/316 (0%)
Strand = Plus / Minus
Query: 5 gaattcacatttagttttattaagaaaagcatattttttgaatattaatccagatgattt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gaattcacatttagttttattaagaaaagcatattttttgaatattaatccagatgattt 358
Query: 65 gtgcaaaatactcagaatagcatcagttcatagggttctgcatagagtaatcacatttac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gtgcaaaatactcagaatagcatcagttcatagggttctgcatagagtaatcacatttac 298
Query: 125 ttttattaaaaaaaaaaagcatatcccaaaaaattaggaaatgagagggtctagcaaggt 184
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ttttatt-aaaaaaaaaagcatatcccaaaaaattaggaaatgagagggtctagcaaggt 239
Query: 185 ctcattccattgttccagtgcttatcatttagttcagtggttctcaacatgtggtttgca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ctcattccattgttccagtgcttatcatttagttcagtggttctcaacatgtggtttgca 179
Query: 245 agccctttgaggagtcacatatcagatatttacattatgattcaaatcaatagcaaacta 304
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 178 agccctttgaggagtcacatatcagatatttacattatgattcaaatcaatggcaaacta 119
Query: 305 caattatgaagtagca 320
|| |||||||||||||
Sbjct: 118 cagttatgaagtagca 103
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 722
Length adjustment: 9
Effective length of query: 314
Effective length of database: 713
Effective search space: 223882
Effective search space used: 223882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no265_o14.g1 MSMg01no265_o14.g1 CHROMAT_FILE:
MSMg01no265_o14.g1 PHD_FILE: MSMg01no265_o14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:33 2005
(290 letters)
>mm_chr9_25648498_25649187
Length = 690
Score = 549 bits (284), Expect = e-161
Identities = 287/288 (99%)
Strand = Plus / Plus
Query: 1 catgtcctcacatgctgtgctctgtgggtttgacctgcttttgtgcagtgacttatgatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgtcctcacatgctgtgctctgtgggtttgacctgcttttgtgcagtgacttatgatt 260
Query: 61 gacaagacacttcaagatgagttttgtgaagttgcagccatgggagtgctcaagcttctg 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 gacaagacacttcaagatgagttttgtgaagttgcagccatgggagtgcttaagcttctg 320
Query: 121 aacatgactttcaccatatctgcatagtcacacttcttgtgtagctagactgatagttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacatgactttcaccatatctgcatagtcacacttcttgtgtagctagactgatagttcc 380
Query: 181 tgtcacttacctgcctagtgacagcaccaagtccacatggcagccagaatttgaaagaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtcacttacctgcctagtgacagcaccaagtccacatggcagccagaatttgaaagaaa 440
Query: 241 tgaagatgttgggagttttcagataatttttgaagagcctctaaagta 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaagatgttgggagttttcagataatttttgaagagcctctaaagta 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
