Query= MSMg01no266_g21.b1 MSMg01no266_g21.b1 CHROMAT_FILE:
MSMg01no266_g21.b1 PHD_FILE: MSMg01no266_g21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:12 2005
(353 letters)
>mm_chr9_75865901_75866651
Length = 751
Score = 671 bits (347), Expect = 0.0
Identities = 351/353 (99%), Gaps = 2/353 (0%)
Strand = Plus / Plus
Query: 1 taaccccaacaagaccaggaaacaacccatcagtggatttacctcactcaacaaaaatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taaccccaacaagaccaggaaacaacccatcagtggatttacctcactcaacaaaaatgc 260
Query: 61 ctgattagttctgatgttttgtatgtacttgctaaacaaataaatgactgctcacctttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgattagttctgatgttttgtatgtacttgctaaacaaataaatgactgctcacctttg 320
Query: 121 cagaggacaagccaagcatcacatagttggaaaacagtcttaaaacagcgattagcacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagaggacaagccaagcatcacatagttggaaaacagtcttaaaacagcgattagcacat 380
Query: 181 tatagtatataatacatagtttctgagaatgagtgccttagtaccagcatccactggctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatagtatataatacatagtttctgagaatgagtgccttagtaccagcatccactggctg 440
Query: 241 ttgttactgtttgggaatcatctttttattacatggtcccaggcagggtttgctggtcaa 300
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgttactgtt--ggaatcatctttttattacatggtcccaggcagggtttgctggtcaa 498
Query: 301 ggaaacatgcaaacgaaatttgaatgctgtaaataaaccacagggaactttac 353
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ggaaacatgcaaacgaaatttgaatgctgtaaataaaccacagggaactttac 551
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 751
Length adjustment: 9
Effective length of query: 344
Effective length of database: 742
Effective search space: 255248
Effective search space used: 255248
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no266_g21.g1 MSMg01no266_g21.g1 CHROMAT_FILE:
MSMg01no266_g21.g1 PHD_FILE: MSMg01no266_g21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:13 2005
(289 letters)
>mm_chr9_76027859_76028547
Length = 689
Score = 534 bits (276), Expect = e-156
Identities = 285/288 (98%)
Strand = Plus / Minus
Query: 1 tagtgctacagtgtcctcttgggacaatggctctggtggtgctcacggccaaacctgcat 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tagtgctacagtgtcctcttgggacaatggctctggtggtgctcacggccaaacctgcaa 429
Query: 61 ctgtgagacagggaaatcaggatgccaagctaaaaaaatttcaattcaaatgtttaagta 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 428 ctgtgagacagggaaatcaggatgccaagctaaaaaaatttcaattcaaacgtttaagta 369
Query: 121 aaaagatcaggagttagaacacatagggtgcagatgttcactgtaatgagagcactggtt 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 368 aaaagatcaggagttagaacacataaggtgcagatgttcactgtaatgagagcactggtt 309
Query: 181 atcttcatgtcctaacactgttcttttgtgatgatctacttctttaagttcggaatagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 atcttcatgtcctaacactgttcttttgtgatgatctacttctttaagttcggaatagta 249
Query: 241 gctatttcaatgtaatgcttggattcatttcagctctgcaaagtaaaa 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gctatttcaatgtaatgcttggattcatttcagctctgcaaagtaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
