CGATNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTAACTGTGGCTATTGATCATCTGTGTAATGATGATCAACATATATAT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTATGAAGGACTCTCTATACCATA
TCTATCCCCTATTATATCTTTATCACACACTTATACACACACATATAACC
TTTCTCACATTCCCCCCCCCTTCTTCAACCCCCCCCCCCTTCCCCCCCTC
CTTTCCCTTCCCCCCTACCTCCAACCATTACATCCCCCCCACAACACCTC
TCCTATACTCATCTTTTTTTTTTTCCNCCCACCCACTCCTCCCCCACCCA
AAAAATTTAAATACACTCCANAAACAAAAACCCCAAAAAAAAATNAAAAA
AATAAATTAANCCCCCCCCCCCAAAAAAAAAAAAAAAAAATTCTGTCTCT
TCCCCCCCCCCCTCCTCTCCCCTTCCCTACTCCCCTCTCCTCCTTCCATA
CACCTATTTTCTCCCCCCCTCCCCCCCCCCCCCCCTCCTTCCTCCTCTCT
ACCCCTCCTCTACCCCCCTTCCCCAAATCCCCCCTCTTTTCTCTCTCTTC
CCCCCCTCCCCCTTTCTCCCTCTCTCCCCTTCATCCCCACTCTCTTTTAT
ATCCCTCCACACCCCCTTTCATCTCACCCCCCCTCTTCCCACTATTTCTT
TTTTTCACCCTACCTCTTTCCCCCCTCTCTCCCCCCCCCCCCTCTCCCCT
CTCCCTTCCTTCCCCCTTAAATTCCCCCCTCTTCATCTCTAT

TGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCTATGGATGAGATCAGAGATCCCTGT
GGATCAAACCAGACCGAGGGTCTCAAAGGATGATATTCTGATAAGTGAAA
GATATGTCCCAGGCAAAGGCACCATGGTTGCTTTCCTGATTGAGCTAACC
TGAAGTCCCTGCCCTTACTCAAAGTGCCTCTTTCAACACGGAAATTTTTC
CTACACTGCCTTCCTGACTGAGCAGAACATTGGCCCCTTCTCCAGATGAG
TCATATGCCACCAGACATACCATCAGGACATAAGTAATACGTACATCAGG
CAGAGGTGAAGGAAGCAATAAACATCTCCGATCGTGCTGATAACTACAAA
GGTCACAGCCAAGCGCATGTTCTTCCCCCAGGAGACTCTTGGGATTTCAG
AAAGGATGTCTATTAGGGAGGTAATCTGCTGCTTCAGACAGTGTTGTCTC
CTGTCTCTGATTCAGTTTTGCCATCTCTATTCCTGTCCCAAGCCAGCCTT
TGTCCATCATGACCTGAACAAGTCCACTCTGCTAACCCCTCACCCCATCA
GATATAACCAGCTCTGACAGAGCCCCATTCCTTCTCCCTTCACCTTGGAA
ATACCCTGTGTACACAGGTGATTCCCATGGTTTCCATGTCTGGATCATCT
GATGATGACCTTCTTTACGGGTCTCTTATTAC

Query= MSMg01no271_p05.g1 MSMg01no271_p05.g1 CHROMAT_FILE:
MSMg01no271_p05.g1 PHD_FILE: MSMg01no271_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:57 2005
         (544 letters)



>mm_chr9_29077347_29078290
          Length = 944

 Score = 1036 bits (536), Expect = 0.0
 Identities = 542/544 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctatggatgagatcagagatccctgtggatcaaaccagaccgagggtctcaaaggatga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctatggatgagatcagagatccctgtggatcaaaccagaccgagggtctcaaaggatga 260

                                                                       
Query: 61  tattctgataagtgaaagatatgtcccaggcaaaggcaccatggttgctttcctgattga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tattctgataagtgaaagatatgtcccaggcaaaggcaccatggttgctttcctgattga 320

                                                                       
Query: 121 gctaacctgaagtccctgcccttactcaaagtgcctctttcaacacggaaatttttccta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctaacctgaagtccctgcccttactcaaagtgcctctttcaacacggaaatttttccta 380

                                                                       
Query: 181 cactgccttcctgactgagcagaacattggccccttctccagatgagtcatatgccacca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cactgccttcctgactgagcagaacattggccccttctccagatgagtcatatgccacca 440

                                                                       
Query: 241 gacataccatcaggacataagtaatacgtacatcaggcagaggtgaaggaagcaataaac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacataccatcaggacataagtaatacgtacatcaggcagaggtgaaggaagcaataaac 500

                                                                       
Query: 301 atctccgatcgtgctgataactacaaaggtcacagccaagcgcatgttcttcccccagga 360
           |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 501 atctccgatcgtgctgataactacaaaggtcacagccaagtgcatgttcttcccccggga 560

                                                                       
Query: 361 gactcttgggatttcagaaaggatgtctattagggaggtaatctgctgcttcagacagtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gactcttgggatttcagaaaggatgtctattagggaggtaatctgctgcttcagacagtg 620

                                                                       
Query: 421 ttgtctcctgtctctgattcagttttgccatctctattcctgtcccaagccagcctttgt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgtctcctgtctctgattcagttttgccatctctattcctgtcccaagccagcctttgt 680

                                                                       
Query: 481 ccatcatgacctgaacaagtccactctgctaacccctcaccccatcagatataaccagct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccatcatgacctgaacaagtccactctgctaacccctcaccccatcagatataaccagct 740

               
Query: 541 ctga 544
           ||||
Sbjct: 741 ctga 744


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 944
Length adjustment: 10
Effective length of query: 534
Effective length of database: 934
Effective search space:   498756
Effective search space used:   498756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)