Query= MSMg01no273_b08.b1 MSMg01no273_b08.b1 CHROMAT_FILE:
MSMg01no273_b08.b1 PHD_FILE: MSMg01no273_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:23 2005
(319 letters)
>mm_chr9_45317576_45318294
Length = 719
Score = 571 bits (295), Expect = e-167
Identities = 310/315 (98%)
Strand = Plus / Minus
Query: 5 gaattcttttctcagggctctttgtagggaaaagtggctaagacccgaagagtctgaagt 64
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 519 gaattcttttctcagggctctttgtacggaaaagtggctaagacccgaagagtctgaagt 460
Query: 65 tttctccacctccacaccctttctataaaccaggattaacataaacacaaataattaagt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 tttctccacctccacaccctttctataaaccaggattaacataaacacaaataattaagt 400
Query: 125 atccttaaagtgcgagtcatatggtaagactgcctgccttggtttccccatgggtcttta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 atccttaaagtgcgagtcatatggtaagactgcctgccttggtttccccatgggtcttta 340
Query: 185 cccttctgttcttgttctctccttccaatctcatctataatcagtcctcatgtgcccagg 244
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 339 cccttctgttcttgttctctccttccaatctcatctctaatcagtcctcatgtgcccagg 280
Query: 245 ctggaggtcttcctggagtatccctccccacaccatcgctatcttcaccccatggccgat 304
|||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 279 ctggaggtctccctggagtatccctccccacaccatcactaccttcaccccatggccgat 220
Query: 305 cagcatctcccagga 319
|||||||||||||||
Sbjct: 219 cagcatctcccagga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_b08.g1 MSMg01no273_b08.g1 CHROMAT_FILE:
MSMg01no273_b08.g1 PHD_FILE: MSMg01no273_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:24 2005
(295 letters)
>mm_chr9_45112843_45113537
Length = 695
Score = 516 bits (267), Expect = e-151
Identities = 284/295 (96%), Gaps = 10/295 (3%)
Strand = Plus / Plus
Query: 1 tcatcactcaaaagtaaagagataaaaacgaaggagagggtaaaattcttactaccacct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcatcactcaaaagtaaagagataaaaacgaaggagagggtaaaattcttactaccacct 260
Query: 61 aaccaaagagatgcactcagtgtttataggaatcaaaaagacccaaatggagaccacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaccaaagagatgcactcagtgtttataggaatcaaaaagacccaaatggagaccacaca 320
Query: 121 caatgctctgtgcgtccagtgccggtggtaacgagaacagcagcagcagcagcagcagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caatgctctgtgcgtccagtgccggtggtaacgagaacagcagcagcagcag-------- 372
Query: 181 agcttttgtgacaatgaacagccacccaccgctctcctcctctatcgctggtgggtaagg 240
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 373 -gcttttgtgacaatgaacagccacc-accgctctcctcctctatcgctggtgggtaagg 430
Query: 241 agatagcacaaccactttactagaacagttgactgggtcagtgagatgactcagt 295
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 431 agatagcacaaccactttacaagaacagttgactgggtcagtgagatgactcagt 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
