Query= MSMg01no273_g05.b1 MSMg01no273_g05.b1 CHROMAT_FILE:
MSMg01no273_g05.b1 PHD_FILE: MSMg01no273_g05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:45 2005
(313 letters)
>mm_chr9_109954396_109955108
Length = 713
Score = 497 bits (257), Expect = e-145
Identities = 306/343 (89%), Gaps = 33/343 (9%)
Strand = Plus / Minus
Query: 4 ggaattcttcacaagcctgtctttcagctgtccatccatgctgacattcagcccgatttc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ggaattcttcacaagcctgtctttcagctgtccatccatgctgacattcagcccgatttc 338
Query: 64 attcagtttaccctctgtcctctgccattcaaatccatcctgaccgatttctttccgaga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 337 attcagtttaccctctgtcctctgccattcaaatccatcctgaccgatttctttccggga 278
Query: 124 gtccatcccgcactctggagggttgcctttagagagctgctcgtcctcggcagcgagagc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gtccatcccgcactctggagggttgcctttagagagctgctcgtcctcggcagcgagagc 218
Query: 184 agcagtgagcgc----------------gga-----------------cactgctcccca 210
|||||||||||| ||| ||||||||||||
Sbjct: 217 agcagtgagcgcggctggctgcttctctggaagcgacatcgtccctttcactgctcccca 158
Query: 211 ctcactcttggagctcttgcaccacccacgctcacgggtcttgcagtgacatcacagcaa 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 ctcactcttggagctcttgcaccacccacgctcacgggtcttgcagtgacatcacagcaa 98
Query: 271 gctcccgttattcagggtaagctctctagttctcccagtctcc 313
||||| | ||||||||||||||||||||||||||||||||||
Sbjct: 97 gctcctgggattcagggtaagctctctagttctcccagtctcc 55
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_g05.g1 MSMg01no273_g05.g1 CHROMAT_FILE:
MSMg01no273_g05.g1 PHD_FILE: MSMg01no273_g05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:12:45 2005
(292 letters)
>mm_chr9_109774269_109774960
Length = 692
Score = 518 bits (268), Expect = e-151
Identities = 286/292 (97%)
Strand = Plus / Plus
Query: 1 aattcctattccctttgaaatacaagccatagttttgtatctacagagcagatggcctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattcctattccctttgaaatacaagccatagttttgtatctacagagcagatggcctgt 260
Query: 61 tccccaaataccatctacaaaacttattacttataacaaccaatacaactaccatttaat 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 tccccaaataccatctacaaaacttattactcataacaaccaatacaactaccatttaat 320
Query: 121 taatataattaaatcctggggtctcgctgggcatggtgattcatgtttgtaatgccagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taatataattaaatcctggggtctcgctgggcatggtgattcatgtttgtaatgccagga 380
Query: 181 tttgggagctagaggcaggagaattgttgcaaagttgaagccagcctgggctatatatag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttgggagctagaggcaggagaattgttgcaaagttgaagccagcctgggctatatatag 440
Query: 241 caagattcatattatgtagggcaaaataaaaagcaaaatgaaaaagtcaggt 292
|||||| || | | |||||||||||||||||||||||||||||||||||||
Sbjct: 441 caagatccagagaaggtagggcaaaataaaaagcaaaatgaaaaagtcaggt 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
