TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATCCGCGGAATT
CACTTCGATTTACCTGACCTTTATTGACAGTTAAGGACAAAAAACTGATG
AAAATATTGAATCCAATCTAGAACAGTTGAATATATTTTTCTGAAAAGAT
GTTTTTGTAACCAGCTAAAAGAGAATATTTACTGTTTCCTAAATCATCAA
ATATTATTCAAAGATAATAATGCATTACATGATATGTATGGCTGTGGATA
ATGTACATTCTCGATTTTGCTCTGAAGTCCAAAGTGAAAGTCTAAAGTAT
AATATGGAAAGGGTCACACTTTTGGCTAATGCTCCTTTGTGAGAATAAAA
GTGCAAAGAAGGATTCTCTTTAGTGAGTGGCGAGACGTGGTGGGTTAGAA
ATTTCTTTACATGCATGCATAGCCTTGTGTGTGCCCGTGTCTGTGTGTGT
GTGTGTGCATGTGAGAGTGTGCATGTCTGTTTGTCATACGCATTTTATGA
AGATAGCTGATGATAACATTTGTTTTTCTTCCTGCTTTATTGAAAATAGA
ATCTTTTCTCATACAATATATCATGGTTACAGTTTTCTTACCTTCCTCTC
CTCCCAGATTCTGACAGCCTCCTCTTCTGTCCATATCCACTCCCTTTCTG
TCTCTCATTACAAAAAAATGTTCTTCTAAGAAATAACAAACACGCTTAAC
TACTCTTAACATCACATGATTTTCCAATTATATCCG

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXATGATACATACCTAAATATAGTAAAATAAAT
TTACAGAAAACAAACTTTTCCCATGAAACAAATTGGAAAGATACTTGAAG
CAATCCAACTAAAATAAAAAACAAGACAAAGCTGACCACTCTCTCCCTAT
CTATTTAATATACTACATGAAGTTCTAGCTAGAGGAATTAGACAACAAAA
GGAGATCAAAGGAATATAAATTGGAAAGGAAGAAGTCAAAATATCACTAT
TTGCAGATGATATTATGGGGTTCTTTCCAGCTTCTGGGTATTATAAATAA
GGCTACTATGATTTTTTTGCACCCCGCGCCCCTGTTTTATGTTGGATCAT
TCTCTGGGTATATGCCCAGGAGTGAAAAAAAAGAGACCTCAGTTACCACT
ATGTCCAATTTTCTGAGAAACCGCCAAACTGATTACCATAGCGGTTGTAT
TAGGTTGTAATCCCACCAAAAACGGAGAAGCATTGCTCTTTCCTCACATC
CTCTCCAGCATCTGCTGTCACCTGAGTTTAAATCTTAGCCATTTTGACTG
GAGTGAGGCGTAATATCATGGTCGCTTCACTTTGAACTTCCTTGATGAAT
AAGCATGCTGACAATTGCTTTACGCGGTATTTTGCCATTTGATAATCCCC
ACTTGTAAATTCATTGTTTAGCTCCGCACCC

Query= MSMg01no274_b05.b1 MSMg01no274_b05.b1 CHROMAT_FILE:
MSMg01no274_b05.b1 PHD_FILE: MSMg01no274_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:34 2005
         (567 letters)



>mm_chr9_11648003_11648969
          Length = 967

 Score = 1033 bits (534), Expect = 0.0
 Identities = 555/562 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcacttcgatttacctgacctttattgacagttaaggacaaaaaactgatgaaaat 64
           ||||||||||||||  || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacttcgatgaacttgacctttattgacagttaaggacaaaaaactgatgaaaat 264

                                                                       
Query: 65  attgaatccaatctagaacagttgaatatatttttctgaaaagatgtttttgtaaccagc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 265 attgaatccaatctagaacagttgaatatatttttctgaaaagatgtttttgtaaccaga 324

                                                                       
Query: 125 taaaagagaatatttactgtttcctaaatcatcaaatattattcaaagataataatgcat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taaaagagaatatttactgtttcctaaatcatcaaatattattcaaagataataatgcat 384

                                                                       
Query: 185 tacatgatatgtatggctgtggataatgtacattctcgattttgctctgaagtccaaagt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tacatgatatgtatggctgtggataatgtacattctcgattttgctctgaagtccaaagt 444

                                                                       
Query: 245 gaaagtctaaagtataatatggaaagggtcacacttttggctaatgctcctttgtgagaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaaagtctaaagtataatatggaaagggtcacacttttggctaatgctcctttgtgagaa 504

                                                                       
Query: 305 taaaagtgcaaagaaggattctctttagtgagtggcgagacgtggtgggttagaaatttc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taaaagtgcaaagaaggattctctttagtgagtggcgagacgtggtgggttagaaatttc 564

                                                                       
Query: 365 tttacatgcatgcatagccttgtgtgtgcccgtgtctgtgtgtgtgtgtgtgcatgtgag 424
           |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 565 tttacatgcatgcatagccttgtgtgtgcccgtgtctgtgtgtgtgtgtgtgtatgagag 624

                                                                       
Query: 425 agtgtgcatgtctgtttgtcatacgcattttatgaagatagctgatgataacatttgttt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agtgtgcatgtctgtttgtcatacgcattttatgaagatagctgatgataacatttgttt 684

                                                                       
Query: 485 ttcttcctgctttattgaaaatagaatcttttctcatacaatatatcatggttacagttt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttcttcctgctttattgaaaatagaatcttttctcatacaatatatcatggttacagttt 744

                                 
Query: 545 tcttaccttcctctcctcccag 566
           ||||||||||| ||||||||||
Sbjct: 745 tcttaccttccactcctcccag 766


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space:   533049
Effective search space used:   533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)