TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTAATTTTTCCCCCGAAGGTAGGGTTGAAAAATACACATTAGCCTG
TGTTCTAAACTAGCAGGCTTACGCGAGATTGTCCAGCCCCTTTCTGACCC
CTTGCACCCAGCAACTGTTAGATCACACGAAGAAAAGGAGACGAATAGAA
ATAACAGATTAGAATATTCTTAGAAGGGAAGTTGAATGTTATGTTTCTGA
GTTCAAGGTCACTCTCATGCTCGCTTGATATTCCTCCTTTAAGCCAACAG
TTAAACCTTCTTCCCACTTGTCTTCCCAGGCCTGAGCAGATCACATTACA
CTCTGGACTCTCCTTTTTTCACCCACCTCTGCTGTTGAGCATTAGTTAGC
TTGTGAGCACTAGTTAGTTCATCGGACCATAAGCCAGTATTTGCTGTGAA
CCAGTGTTCACTACTGGGAGGTCTTGAGAGCTGGGTTAGGGTGACCCCAC
TGAAAGACATTGACTATTTCATAATTTTCACTTGAACCCATTTTGCCAGC
TGAAATACTAGAGAGATATTTGGGGCTACAGAGACATGAAAATAGATTCC
ATCGTTTCCGTGGAGCCTAGGAACCACAGAGGTTTTGTGGTCTCAGACCA
CAGTTCTGCAGTATTATCTGCATGGATTCTCAGAGTTTTCCTTGAGTCAT
ATAATTTAGTGGGGCGACGGTTGCTCTGCCTACCTCACGA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCGCAAAGTCAGCCTGCTAAT
GATTGCAGAAACAGGCTACGTAAATCCCATTTCCTTGCTTAGTTTTCAAT
GTTATCAATTATGTATTTGGGACAGGACCTTGGAAAATTGCTTTGAGAAA
ACACAAGAAATAGAGTCCCAGGTGATGCGAAACCATTTGTGACACACCGC
CCATGTGAAGGGCATTCTGGGAAAAAGAGAGAGGATGACTGGAGCCCTCA
GCTATTCATCTCAGGACTTAGTGCTAAAAGAAACAGCCACACTACAATGA
GCATGCTGTTCTAAATTGTTTTTATACCCCCCCCCACATTCATGACCAGG
CAAGTTGTCTTGGGTGCCTCAGGCTAATTCGTGAAATATTCAGATCTGCT
TTCATTCTTCAAAGAAAAAAAAAAGTGAGGCCTCCATTTCTCAGATAAAG
CATGTTTCGCAGTTTGCATTCCTACAGCATGTCAGCCGAAGACACACACT
CAGATACACAATGGACTTGTGCTGGGGTTGGAGCAAGGACACTGACAGTG
ACTAGACCTGACCTCCCCACAGGCTGTTGTGGAAGTAAAATACACTGTGA
GGGTTTGGTGAGAAGAACTCTCTCCCATTTGGCATTATTCTGCGGCTGGT
TACAAGACCCCATATATTATTTGTGGATAAAGATTCTAGGGAGGA

Query= MSMg01no277_m22.b1 MSMg01no277_m22.b1 CHROMAT_FILE:
MSMg01no277_m22.b1 PHD_FILE: MSMg01no277_m22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:00 2005
         (239 letters)



>mm_chr9_117257814_117258452
          Length = 639

 Score =  443 bits (229), Expect = e-129
 Identities = 235/237 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   attgtccagcccctttctgaccccttgcacccagcaactgttagatcacacgaagaaaag 60
           |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 437 attgtccagcccctttctgaccccttacacccagcaactgttagatcacatgaagaaaag 378

                                                                       
Query: 61  gagacgaatagaaataacagattagaatattcttagaagggaagttgaatgttatgtttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 gagacgaatagaaataacagattagaatattcttagaagggaagttgaatgttatgtttc 318

                                                                       
Query: 121 tgagttcaaggtcactctcatgctcgcttgatattcctcctttaagccaacagttaaacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tgagttcaaggtcactctcatgctcgcttgatattcctcctttaagccaacagttaaacc 258

                                                                    
Query: 181 ttcttcccacttgtcttcccaggcctgagcagatcacattacactctggactctcct 237
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 ttcttcccacttgtcttcccaggcctgagcagatcacattacactctggactctcct 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space:   144900
Effective search space used:   144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no277_m22.g1 MSMg01no277_m22.g1 CHROMAT_FILE:
MSMg01no277_m22.g1 PHD_FILE: MSMg01no277_m22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:00 2005
         (291 letters)



>mm_chr9_117106328_117107018
          Length = 691

 Score =  532 bits (275), Expect = e-155
 Identities = 287/291 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcaccgcaaagtcagcctgctaatgattgcagaaacaggctacgtaaatcccatttcctt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 201 tcaccgcaaagtcagcctgctaatgattgcagaaacaggctacgtaaatacaatttcctt 260

                                                                       
Query: 61  gcttagttttcaatgttatcaattatgtatttgggacaggaccttggaaaattgctttga 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 gcttagttttcaatgttatcaattatgtatttgggacaggaccttggaaaattgctctga 320

                                                                       
Query: 121 gaaaacacaagaaatagagtcccaggtgatgcgaaaccatttgtgacacaccgcccatgt 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 gaaaacacaagaaatagagtcccaggtgatgcgaaaccatttgtgacacaccacccatgt 380

                                                                       
Query: 181 gaagggcattctgggaaaaagagagaggatgactggagccctcagctattcatctcagga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaagggcattctgggaaaaagagagaggatgactggagccctcagctattcatctcagga 440

                                                              
Query: 241 cttagtgctaaaagaaacagccacactacaatgagcatgctgttctaaatt 291
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttagtgctaaaagaaacagccacactacaatgagcatgctgttctaaatt 491


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space:   192324
Effective search space used:   192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)