Query= MSMg01no280_p12.b1 MSMg01no280_p12.b1 CHROMAT_FILE:
MSMg01no280_p12.b1 PHD_FILE: MSMg01no280_p12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:56 2005
(223 letters)
>mm_chr9_59732434_59733056
Length = 623
Score = 408 bits (211), Expect = e-118
Identities = 218/223 (97%), Gaps = 5/223 (2%)
Strand = Plus / Minus
Query: 1 attcttgtaaagagagatgatctaagaactgagcctattaagcactctaggagacagccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 attcttgtaaagagagatgatctaagaactgagcctattaagcactctaggagacagccc 473
Query: 61 ccttaaacaggtgatgggaaatgatcaggaaaacaaaacaaaacagaacaaaacccacaa 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 472 ccttaaacaggtgatgggaaatgatcaggaaaacaaaacaa-----aacaaaacccacaa 418
Query: 121 aatagctgaagcaccactgctctaccaagagaaatacactgtataagaacaaacagaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 aatagctgaagcaccactgctctaccaagagaaatacactgtataagaacaaacagaaag 358
Query: 181 gttaggtgctaaagcccatggcctataaacttaagacttaagt 223
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gttaggtgctaaagcccatggcctataaacttaagacttaagt 315
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 223
Length of database: 623
Length adjustment: 9
Effective length of query: 214
Effective length of database: 614
Effective search space: 131396
Effective search space used: 131396
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no280_p12.g1 MSMg01no280_p12.g1 CHROMAT_FILE:
MSMg01no280_p12.g1 PHD_FILE: MSMg01no280_p12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:56 2005
(284 letters)
>mm_chr9_59626976_59627659
Length = 684
Score = 534 bits (276), Expect = e-156
Identities = 282/284 (99%)
Strand = Plus / Plus
Query: 1 cataaattcattgtttttaatagctgagtagtactccattgtgtaaccgtaatacttgtt 60
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 cataaattcattgtttttaatagctgagtagtactccattgtgtaaatgtaatacttgtt 260
Query: 61 cttatacagtgagtttatgttcagaaagctgtagtcaatatggttgttaaagctttcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttatacagtgagtttatgttcagaaagctgtagtcaatatggttgttaaagctttcatt 320
Query: 121 tttgaaaacaatattcaatgtgactgctcagtgtttctatcttttgtgttccagttcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgaaaacaatattcaatgtgactgctcagtgtttctatcttttgtgttccagttcttt 380
Query: 181 tgccaagaaaatggtttgcccagtcctgaccacatactgtcctttctgatgggacaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgccaagaaaatggtttgcccagtcctgaccacatactgtcctttctgatgggacaagat 440
Query: 241 ccaatatgaatgtaagtgatggaggaagacgacgctttgaggat 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccaatatgaatgtaagtgatggaggaagacgacgctttgaggat 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
