Query= MSMg01no289_k16.b1 MSMg01no289_k16.b1 CHROMAT_FILE:
MSMg01no289_k16.b1 PHD_FILE: MSMg01no289_k16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:01 2005
(316 letters)
>mm_chr9_15127286_15127998
Length = 713
Score = 543 bits (281), Expect = e-159
Identities = 302/313 (96%), Gaps = 9/313 (2%)
Strand = Plus / Plus
Query: 5 gaattctggtcgaagctgttgaaaagactgttcagatcctgcattaaaaaaaaaaa-tca 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 205 gaattctggtcgaagctgttgaaaagactgttcagatcctgcattaaaaaaaaaaaatca 264
Query: 64 caaagtcaacactggatagagagtcacaatttaagtaaactgtaaataggttttatgaac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caaagtcaacactggatagagagtcacaatttaagtaaactgtaaataggttttatgaac 324
Query: 124 tacagtttgagaaggaaaagttgatatgtataaacaaacatacaataaacccagtggtca 183
|||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 325 tacagttttagaaggaaaagttgatatgtataaaca----tacaataaacccagtggtca 380
Query: 184 gtaattttcacaaaaagcatgtattctctaatattgtctaagttccattgttattcccat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaattttcacaaaaagcatgtattctctaatattgtctaagttccattgttattcccat 440
Query: 244 gagaattttgagtaacaaaaatagaacgtgtgtgtgtgtgtgtgtgtgtgtacacatacc 303
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 441 gagaattttgagtaacaaaaatagaacgtgtgtgtgtgtgtgtgtgt----acacataca 496
Query: 304 atgtttagaaaga 316
|||||||||||||
Sbjct: 497 atgtttagaaaga 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 713
Length adjustment: 9
Effective length of query: 307
Effective length of database: 704
Effective search space: 216128
Effective search space used: 216128
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no289_k16.g1 MSMg01no289_k16.g1 CHROMAT_FILE:
MSMg01no289_k16.g1 PHD_FILE: MSMg01no289_k16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:01 2005
(289 letters)
>mm_chr9_15284067_15284755
Length = 689
Score = 532 bits (275), Expect = e-155
Identities = 284/287 (98%)
Strand = Plus / Minus
Query: 1 tcatcaacaggaagtcagtcccagcctgggacttcatgattggagggaagggtcaagttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tcatcaacaggaagtcagtcccagcctgggacttcatgattggagggaagggtcaagttt 352
Query: 61 acctgtcacccaaaaaggtgacattgttactgagagatgagcaggatctggttgtcagtg 120
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 351 acctgtcacccaaaaaggtgacattgttactgagagatgagtgggatctggttgtcagtg 292
Query: 121 gtgctgaggacaagtgtctgtgaccagccagtgcaaggttcaggtagagaaagggctccc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 atgctgaggacaagtgtctgtgaccagccagtgcaaggttcaggtagagaaagggctccc 232
Query: 181 tgtgctgctatgttaattagaaaggagatgacgcaggcctgttgtaaaggttaaataaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 tgtgctgctatgttaattagaaaggagatgacgcaggcctgttgtaaaggttaaataaga 172
Query: 241 ggagacatgtaagatgcttagtggaagctcactaaaggccacctgtc 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 ggagacatgtaagatgcttagtggaagctcactaaaggccacctgtc 125
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
