Query= MSMg01no294_d11.b1 MSMg01no294_d11.b1 CHROMAT_FILE:
MSMg01no294_d11.b1 PHD_FILE: MSMg01no294_d11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:51 2005
(319 letters)
>mm_chr9_111326250_111326968
Length = 719
Score = 489 bits (253), Expect = e-143
Identities = 299/315 (94%), Gaps = 2/315 (0%)
Strand = Plus / Minus
Query: 4 ggaattccaggtggatgcccctgaacctagcctttcacatggatgctcaggatctgaacg 63
||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 327 ggaattccaggtggatgcccctgaacctaacctttcacatggatgctcgggatctgaaca 268
Query: 64 cagttccccacgattgcccagaaagaacttagacgaccaagccattcccagcctcacaaa 123
||||||||||| |||| |||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 267 cagttccccacaattgtgcagaaagaacttagacaaccaagccatccccagcctcacaaa 208
Query: 124 attatatctaccaaacctgaacatatagccatcctgtgaccctgcgattataccatcaaa 183
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 207 attatatctaacaaacctgaacatatagccatcctgtgaccctgcaattataccatcaaa 148
Query: 184 gtgtgtgtgtgtccaaaagaagtaggaatgttcatgattgctcagaacagaacagtctat 243
|||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 147 gtgtgtgtgt--ccaaaagaagtagaaatgttcatgattgctcagaacagaacagtctat 90
Query: 244 ggtagccatgttagaattgttaaaacaactgctttcttacccagtaagactgaagaagag 303
|||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||
Sbjct: 89 ggtagccatgttagaattgttaaaacaactgcattcttacccaataggactgaagaagag 30
Query: 304 acaatcaccagcatt 318
|||||||||||||||
Sbjct: 29 acaatcaccagcatt 15
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no294_d11.g1 MSMg01no294_d11.g1 CHROMAT_FILE:
MSMg01no294_d11.g1 PHD_FILE: MSMg01no294_d11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:29:51 2005
(286 letters)
>mm_chr9_111180320_111181001
Length = 682
Score = 456 bits (236), Expect = e-133
Identities = 266/280 (95%), Gaps = 8/280 (2%)
Strand = Plus / Plus
Query: 9 tttgtctaaagcagctagtggccaccacaaagtattttttt--cttctttaataaagggt 66
||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 209 tttgtctaaagcagccaatggccaccacaaagtatttttttttcttctttaataaagggt 268
Query: 67 agatgtcccatctcccagttcatctcaaggggcattctcacctctctagaacataacttg 126
|||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 269 agatgtcccatctcccagctcatctcaaggggca------cctctctagaacataacttg 322
Query: 127 tccctgtgtcgttattttgttctatcttccagtagcgtctccctgatgcctcccaaataa 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tccctgtgtcgttattttgttctatcttccagtagcgtctccctgatgcctcccaaataa 382
Query: 187 tcactaagcaaactgtttagtgttttagttctgcatcaggattgctgaagttgctgtaag 246
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 383 tcactaagcaaactgtttagtgttttagttctgcatcaggattgctgaagttgccggaag 442
Query: 247 cagacaaaagtttagttgtctgtgacaggttgtctgagct 286
||||||||||||||||||| ||||||||||||||||||||
Sbjct: 443 cagacaaaagtttagttgtttgtgacaggttgtctgagct 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 682
Length adjustment: 9
Effective length of query: 277
Effective length of database: 673
Effective search space: 186421
Effective search space used: 186421
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
