Query= MSMg01no302_c18.b1 MSMg01no302_c18.b1 CHROMAT_FILE:
MSMg01no302_c18.b1 PHD_FILE: MSMg01no302_c18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:45 2005
(236 letters)
>mm_chr9_14673322_14673957
Length = 636
Score = 418 bits (216), Expect = e-121
Identities = 231/236 (97%)
Strand = Plus / Minus
Query: 1 taaaagtacaaatgtacacacacagaaggcaaagctacagataaatttacagcatattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 taaaagtacaaatgtacacacacagaaggcaaagctacagataaatttacagcatattaa 485
Query: 61 caggcttttttctttctttttcttttttttttcttttttcctttttttacaaattgaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 caggcttttttctttctttttcttttttttttcttttttcctttttttacaaattgaggg 425
Query: 121 ctgaactcatttctttacttttctgaacttttcaaagtggcaatactaatttctctttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ctgaactcatttctttacttttctgaacttttcaaagtggcaatactaatttctctttgt 365
Query: 181 ttttaagaggccaaaatgtgtcctgtctggtcatggacaaagccaagatcactgaa 236
|||||||| ||||||||| |||||||||||||||||| | ||||||| ||||||||
Sbjct: 364 ttttaagaagccaaaatgggtcctgtctggtcatggatagagccaaggtcactgaa 309
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 636
Length adjustment: 9
Effective length of query: 227
Effective length of database: 627
Effective search space: 142329
Effective search space used: 142329
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no302_c18.g1 MSMg01no302_c18.g1 CHROMAT_FILE:
MSMg01no302_c18.g1 PHD_FILE: MSMg01no302_c18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:39:45 2005
(290 letters)
>mm_chr9_14514928_14515617
Length = 690
Score = 551 bits (285), Expect = e-161
Identities = 289/291 (99%), Gaps = 2/291 (0%)
Strand = Plus / Plus
Query: 1 tcttcacttaatgtaatacccgaaagagagagagagagagagagagagaga--ctgttgt 58
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 199 tcttcacttaatgtaatacccgaaagagagagagagagagagagagagagagactgttgt 258
Query: 59 ctgtctgtttgtaacagggatgactacagtggtctgcaggggggaactgagcaggcatgt 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ctgtctgtttgtaacagggatgactacagtggtctgcaggggggaactgagcaggcatgt 318
Query: 119 gagtgattgcatggcttagcagctgtgggcccagacctggtagatgaggactatactcat 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gagtgattgcatggcttagcagctgtgggcccagacctggtagatgaggactatactcat 378
Query: 179 ttttattgtaagtagaaagctttctggtagcaggaatgccaaccttaacttttctggggt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ttttattgtaagtagaaagctttctggtagcaggaatgccaaccttaacttttctggggt 438
Query: 239 gtgatgaaatcatgcttaggctctagtctccagctgtacatgcaaagcata 289
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gtgatgaaatcatgcttaggctctagtctccagctgtacatgcaaagcata 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
