Query= MSMg01no306_i17.b1 MSMg01no306_i17.b1 CHROMAT_FILE:
MSMg01no306_i17.b1 PHD_FILE: MSMg01no306_i17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:22 2005
(663 letters)
>mm_chr9_11636934_11637996
Length = 1063
Score = 1236 bits (639), Expect = 0.0
Identities = 654/659 (99%)
Strand = Plus / Plus
Query: 5 gaattcgttaattacaagcttaattattgtactaattatcattttcattagaccatatat 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcgttaattacaagtttaattattgtactaattatcattttcattagaccatatat 264
Query: 65 aaaaatgtagtacctctaagcaacaatttcaatttgcagatcaggaatgtgggaaagctc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaaaatgtagtacctctaagcaacaatttcaatttgcagatcaggaatgtgggaaagctc 324
Query: 125 agcttggcagttcctcactgagtcatttgtgagatggaacctaagtcttatctagtttta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agcttggcagttcctcactgagtcatttgtgagatggaacctaagtcttatctagtttta 384
Query: 185 gccatgtggtacatctgataggctgacatccatcctggctttctcatacagctatgactt 244
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 385 gccatgtggtacatctgataggctgacatccagcctggctttctcatacagctatgactt 444
Query: 245 gatgaaagctgctcatctgaagtttccaatgcacacttgtgtgcgtagaagccctgctaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gatgaaagctgctcatctgaagtttccaatgcacacttgtgtgcgtagaagccctgctaa 504
Query: 305 ttaaggtcatagtttacagtgtccagatagctcttctgagcttggcacaaaatggaggag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttaaggtcatagtttacagtgtccagatagctcttctgagcttggcacaaaatggaggag 564
Query: 365 tccctttatgagcaggactttcccttctttgatcttgtcttgggagcatgatcctccatg 424
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 565 tccctttatgagcaggactttcccttctttgatcttgtcttgggagcatgaccctccatg 624
Query: 425 taatctacctggagagggtcaagtagtccttgacagacctccacgttcaacttcatcttt 484
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 625 taatctacctggagagggtcaagtagtccttgacagacctccacgtccaacttcatcttt 684
Query: 485 gccaataagaattcatccaggaagtttctgggattcctggaaagcctctacatgtaaata 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gccaataagaattcatccaggaagtttctgggattcctggaaagcctctacatgtaaata 744
Query: 545 aggtattaaaagtaatttaaactctagccaatgattttacaatcgccctgaaaacttccc 604
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 745 aggtattaaaagtaatttaaactctagccaatgattttacaatcaccctgaaaacttccc 804
Query: 605 actctccaaggtacattgatagccattgtccatcccaaataaagtctatgcatacaagg 663
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 actctccaaggtacattgatagccattgtccatcccaaataaagtctatgcatacaagg 863
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no306_i17.g1 MSMg01no306_i17.g1 CHROMAT_FILE:
MSMg01no306_i17.g1 PHD_FILE: MSMg01no306_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:22 2005
(680 letters)
>mm_chr9_11647687_11648764
Length = 1078
Score = 949 bits (491), Expect = 0.0
Identities = 514/523 (98%), Gaps = 4/523 (0%)
Strand = Plus / Minus
Query: 1 accgccaatcatccgttttaatgtcatttactgaacacccacaagataaaccggcttaca 60
|||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 520 accgccaatcatcccttttaatgtcatttactgaacacccacaagataaacaggcttaca 461
Query: 61 atatatgctcatcttaaatcatttaccacatggagggactatataatgaatgtgactgat 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 460 atatatgctcatcttaaatcatttaccacatggagggactatacaatgaatgtgactgat 401
Query: 121 gtgacttttgaaaaaataactagatgcacaatgcagtcctctttaaatatgtaatcttat 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 400 gtgacttttgaaaaaataactagatgcacaatgtagtcctctttaaatatgtaatcttat 341
Query: 181 atggacaaatggaatgtgcattaaaaaaattatgtttttgttattcttgtgaagaagtga 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 340 atggacaaatggaatgtgcattaaaaaaattatgtttttgttattcttgt---gaagtga 284
Query: 241 taagaaatcacaataaggttttaatgatatttttaaatgtacatttt-aaacaaaattgt 299
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 283 taagaaatcacaataaggttttaatgatatttttaaatgtacattttaaaacaaaattgt 224
Query: 300 atcttgattagtaaagtaacaccataataaaaatgttaaaattaaatattaaaatttaaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 atcttgattagtaaagtaacaccataataaaaatgttaaaattaaatattaaaatttaaa 164
Query: 360 atattatatattaacaaatatttttaaaatatttatttatggccttataaactgtattca 419
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 163 atattatatattaacaaatattttaaaaatatttatttatggccttataaactgtattca 104
Query: 420 atctctggaccctacatgttgtcttctgatctcagcatatccccagtaacacagttgtgc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 atctctggaccctacatgttgtcttctgatctcagcatatccccagtaacacagttgtgc 44
Query: 480 acagatacacagatactacacacatgcaaatacacaaatatag 522
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 acagatacacagatactacacacatgcaaatacacaaatatag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1078
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1068
Effective search space: 715560
Effective search space used: 715560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
