Query= MSMg01no306_i24.b1 MSMg01no306_i24.b1 CHROMAT_FILE:
MSMg01no306_i24.b1 PHD_FILE: MSMg01no306_i24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:23 2005
(612 letters)
>mm_chr9_110702182_110703192
Length = 1011
Score = 1129 bits (584), Expect = 0.0
Identities = 605/612 (98%), Gaps = 1/612 (0%)
Strand = Plus / Plus
Query: 1 caaatgcctgactgatagctcttgggtgtcaccgccccctgggactggagttatatatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaatgcctgactgatagctcttgggtgtcaccgccccctgggactggagttatatatga 260
Query: 61 gttgtgagtctccacacgctgagggaggtgaacccaggtctcttaactgctgagccatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttgtgagtctccacacgctgagggaggtgaacccaggtctcttaactgctgagccatct 320
Query: 121 ctctagcaccttgggtggattttgcctcacgaaaggatgatctgctggccagcttctcaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctctagcaccttgggtggattttgcctcacgaaaggatgatctgctggccagcttctcag 380
Query: 181 tggaagttcctgccttggtatttatggagttctttgtgcctagaggaattgggtgagcca 240
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 381 tggaagttcctgccttggtatttatggagttccttgtgcctaggggaattgggtgagcca 440
Query: 241 caggtctctgttggtatgcatcttatccgtgagaagaagtcaattgcgataccttttagg 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cgggtctctgttggtatgcatcttatccgtgagaagaagtcaattgcgataccttttagg 500
Query: 301 gttctatctcctgagagcctgtgattgtgttctagaaagtgaagaaaattggctgggtgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gttctatctcctgagagcctgtgattgtgttctagaaagtgaagaaaattggctgggtgt 560
Query: 361 ggtgttacgtgcagaactatggatagttcgagactagtcagggctatggaaagaccccat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggtgttacgtgcagaactatggatagttcgagactagtcagggctatggaaagaccccat 620
Query: 421 ctcactgacaaataaaggatggacaggctatctcctctctaccacactgacatcagtaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctcactgacaaataaaggatggacaggctatctcctctctaccacactgacatcagtaat 680
Query: 481 gagtttgatgggctgtcatttcttcatcctctcaggccttgcttccctttcagaaatact 540
|||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 681 gagtttgatgggctgtcatttcttcatcctctcaggtcttgcttcc-tttcagaaatact 739
Query: 541 actcttcttttgtcttagtttcccccccttgaagcatgagaattggacccagggccttaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 actcttcttttgtcttagtttcccccccttgaagcatgagaattggacccagggccttaa 799
Query: 601 atgtgctagtga 612
|||||||||||
Sbjct: 800 gtgtgctagtga 811
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1011
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1001
Effective search space: 602602
Effective search space used: 602602
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no306_i24.g1 MSMg01no306_i24.g1 CHROMAT_FILE:
MSMg01no306_i24.g1 PHD_FILE: MSMg01no306_i24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:47:23 2005
(319 letters)
>mm_chr9_110860044_110860762
Length = 719
Score = 565 bits (292), Expect = e-165
Identities = 314/326 (96%), Gaps = 9/326 (2%)
Strand = Plus / Minus
Query: 1 acagcaacctgcctgaaggcccactcccaccaagctcaaataacaggaaacaaaatatac 60
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 467 acagcaacctgcctgaaggcccactcccaccaagctcaaataacaggcaccaaaatatac 408
Query: 61 ttctccagggcgcttttctccagcctttctgcctccttcttctgccatgctttgtgcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ttctccagggcgcttttctccagcctttctgcctccttcttctgccatgctttgtgcttc 348
Query: 121 ttgacacgagtttcccataaggctctgacaacagagatgtcaaacacgaccactttgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ttgacacgagtttcccataaggctctgacaacagagatgtcaaacacgaccactttgtgt 288
Query: 181 cccatttggggagcagcataaagttacctaggaaaaaaatacatatgtcagctccatatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 cccatttggggagcagcataaagttacctaggaaaaaaatacatatgtcagctccatatg 228
Query: 241 cgcatagactgggcttttcaaacaga-----ttaaa----gtgtgtgtgtgtgtgtgtga 291
|||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 227 cgcatagactgggcttttcaaacagatatatttaaagtgtgtgtgtgtgtgtgtgtgtga 168
Query: 292 tatgtgtgaatgtagtatatgtatgt 317
||||||||| ||||||||||||||||
Sbjct: 167 tatgtgtgagtgtagtatatgtatgt 142
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
