ACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCAAGAGGATCCGCG
GAATTCCAACTCTACCCACAAAAATAACAGGAAGCAACAATTACATTTCC
TGAATATCTCTTAATATCAATAACCCAAATTTCCAATAAAAAGACATAGA
CTAACAGACTGGCTACACAAACAGGACCCAACATTTTGCTGCTTACAGGA
AATCCACTTCAGGAAAAAAGAAAGGCACTACCTCATAGTAAAAGGTTGGA
AAACAATTTTCCAAGCAAATGGTCTAAAGAAACAAGCTGGAGTAGCCATT
CTAATACCGAATAAAATTGACTTCCAACCCAAAGGTATCAAAAAAAACCC
AAAAGGATGGACACTTCATACTCATCAAAGTTAAAATCTTCCAGGATTAA
CTATGAATTCTGAATATCTCCGCTCCAAATGCAAGGGCAGCAACATTCAT
TAAAGAAACTTAAGTAAAGCTCGAAGCACACATTGCACCTCACACAATAA
CAGTGGGAGAGTTCAACACCCAACTCATCAATGGACAGATCCTGGAAACA
GAAACTAAACAGAGACACATTGAAATTAACAGAAGTTATGAAACAAATTG
ATTTAACAGATATCTACAGAACATTGTATCCTAAAACAAAAGGATATACC
TTCTTCTCAGCACTTCATGGTACCTTCTCCAAATCTGACCATATAATTGG
TCACAAAACAGTCCTCAACAGATACAAAG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCAGGATAAATGAAATGCATTGGC
TAGTGTTTAAAGTTCTGTGAATGCTCTAATTTGCATTGAGAGGCCTTCTA
GGAATCTTAAGTACTTGCTAGGCAGATTCGTATGAGGGAGGGGGAAGAGG
AAATTTACAGGTCTGGAAGATGCAGGAGAGATTGGGCTTCTCAGACAAGG
TCAGACAAGGGATAAAGGGAGTACTGCTGGTACTGGGAGTACTCAGTTTT
TGGTGAGCTTAGATGAGCTGTCTGGTCATGGTAGAATTAGACCTTAATTA
CCAGAGTTCCTACAGATAGTTATGCTCAAGAGCAGCCCAGGCTAGAAGTG
CCTTGCCTTACATTTACCGCCCCCTAATGTTCCAGTGATCAGCATAAGGT
ACCTCCATATGATTCAGATGTGGTTGTATGACTGGAAATGTATTGCTTAT
GCTCAACGGATGGCTATGTGACAAACAACTTGGTTTTGCCTATGTCAAGA
AACGCTAAGGATTATAACCCTTGTTTGAAATAAACTTGAGAGATGATATA
TGTTTTGTTAGAGACTCTATGGTGAGGAACAGAATATGCCATCTGAACAG
GGAAATGTTCTTTGTAAAGTTCCCTTCCAATTAATGTATTTAATTTTCCC
ATTTAAAAGTCTCATGATATATATGTA

Query= MSMg01no307_g04.g1 MSMg01no307_g04.g1 CHROMAT_FILE:
MSMg01no307_g04.g1 PHD_FILE: MSMg01no307_g04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:25 2005
         (649 letters)



>mm_chr9_11339844_11340892
          Length = 1049

 Score = 1087 bits (562), Expect = 0.0
 Identities = 628/650 (96%), Gaps = 3/650 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcaggataaatgaaatgcattggctagtgtttaaagttctgtgaatgctctaatttgcat 60
           |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 202 tcaggataaatgaaatgcattggctagtgtgtaaagttctgtgaatgct-taatttgcat 260

                                                                       
Query: 61  tgagaggccttctaggaatcttaagtacttgctaggcagattcgtatgagggagggggaa 120
           ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 261 tgagaggccttctaggaatcttaagtacttgctaggcagattcttatgagggagggggga 320

                                                                       
Query: 121 gaggaaatttacaggtctggaagatgcaggagagattgggcttctcagacaaggtcagac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaggaaatttacaggtctggaagatgcaggagagattgggcttctcagacaaggtcagac 380

                                                                       
Query: 181 aagggataaagggagtactgctggtactgggagtactcagtttttggtgagcttagatga 240
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 aagggataaagggagtactgctggtactgggagcactcagtttttggtgagcttagatga 440

                                                                       
Query: 241 gctgtctggtcatggtagaattagaccttaattaccagagttcctacagatagttatgct 300
           |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 441 gctgtctggtcatggtagaattagaccttaattacctgagttcctacagatagctatgct 500

                                                                       
Query: 301 caagagcagcccaggctagaagtgccttgccttacatttaccgccccctaatgttccagt 360
           ||||||||||||||||||||| ||||||||||||||||||| | |  ||||||||||| |
Sbjct: 501 caagagcagcccaggctagaaatgccttgccttacatttactgtcttctaatgttccaat 560

                                                                       
Query: 361 gatcagcataaggtacctccatatgattcagatgtggttgtatgactggaaatgtattgc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 561 gatcagcataaggtacctccatatgattcagatgtggttgtatgactgggaatgtattgc 620

                                                                       
Query: 421 ttatgctcaacggatggctatgtgacaaacaacttggttttgcctatgtcaagaaacgct 480
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttatgctcaacggatggctatttgacaaacaacttggttttgcctatgtcaagaaacgct 680

                                                                       
Query: 481 aaggattataacccttgtttgaaataaacttgagagatgatatatgttttgttagagact 540
           ||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||
Sbjct: 681 aaggattataacccttgtttgaaataaacttgatagatgatatatgtttcgttggagact 740

                                                                       
Query: 541 ctatggtgaggaacagaatatgccatctgaacagggaaatgttctttgtaaagttccctt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctatggtgaggaacagaatatgccatctgaacagggaaatgttctttgtaaagttccctt 800

                                                             
Query: 601 ccaattaatgtatttaattt-tcccatttaaaagtctcatgatatatatg 649
           ||||||||||| |||||||| ||| |||||||||||||||||| ||||||
Sbjct: 801 ccaattaatgtgtttaatttctcc-atttaaaagtctcatgatttatatg 849


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space:   663921
Effective search space used:   663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)