Query= MSMg01no309_l16.b1 MSMg01no309_l16.b1 CHROMAT_FILE:
MSMg01no309_l16.b1 PHD_FILE: MSMg01no309_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:23 2005
(317 letters)
>mm_chr9_111951950_111952666
Length = 717
Score = 605 bits (313), Expect = e-178
Identities = 313/313 (100%)
Strand = Plus / Plus
Query: 5 gaattcctggcaatatgtctcaagttatggcttcatctctccagaatcgctgcagttgct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctggcaatatgtctcaagttatggcttcatctctccagaatcgctgcagttgct 264
Query: 65 gcaataaagcatcatttaccagtctctgataattaaaatttgaatattctatatctgtga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcaataaagcatcatttaccagtctctgataattaaaatttgaatattctatatctgtga 324
Query: 125 ctatgctatggtttttattttcagttactgtaactttttctttttctgtcaattccatca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctatgctatggtttttattttcagttactgtaactttttctttttctgtcaattccatca 384
Query: 185 taactaaggagtcttagtaatcttttcatttagcctcagtttattttaagacacaggaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taactaaggagtcttagtaatcttttcatttagcctcagtttattttaagacacaggaaa 444
Query: 245 ggtttggtgtttctgtttacatattgtagagttattgtgtccaagtagctctctacccag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggtttggtgtttctgtttacatattgtagagttattgtgtccaagtagctctctacccag 504
Query: 305 acacgtgtctctc 317
|||||||||||||
Sbjct: 505 acacgtgtctctc 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no309_l16.g1 MSMg01no309_l16.g1 CHROMAT_FILE:
MSMg01no309_l16.g1 PHD_FILE: MSMg01no309_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:51:23 2005
(268 letters)
>mm_chr9_112111688_112112355
Length = 668
Score = 470 bits (243), Expect = e-137
Identities = 252/255 (98%)
Strand = Plus / Minus
Query: 1 cacaccaggtactattctgtgagggctgagcacaagggtatctcaacccagtgctaaaga 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 424 cacaccaggtactattctgtgaaggctgagcacaagggtatctcaacccagtgctaaaga 365
Query: 61 gcgcttcctttacatcatgaccagggagaaaagccttgactggagtccagcaagttacca 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 364 gcgcttcctttacatcatgaccggggagaaaagccttgactggagtccagcaagttacca 305
Query: 121 gcgtacctgtctgtgagaggtttgtaagcacctcacactgcccctgggcatactcactca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gcgtacctgtctgtgagaggtttgtaagcacctcacactgcccctgggcatactcactca 245
Query: 181 cttccggatcagcgtctcccacctgacctgcaagtgagcaggccggtgtgtgtgtgtgtg 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 244 cttccggatcagcgtctcccacctgacctgcaagtgagcaggccagtgtgtgtgtgtgtg 185
Query: 241 tgtgtgtgtgtgtgt 255
|||||||||||||||
Sbjct: 184 tgtgtgtgtgtgtgt 170
Score = 80.0 bits (41), Expect = 1e-19
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 226 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 266
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 544
Score = 78.1 bits (40), Expect = 5e-19
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 227 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 266
||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 59
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 7
Length of query: 268
Length of database: 668
Length adjustment: 9
Effective length of query: 259
Effective length of database: 659
Effective search space: 170681
Effective search space used: 170681
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
