Query= MSMg01no312_h19.b1 MSMg01no312_h19.b1 CHROMAT_FILE:
MSMg01no312_h19.b1 PHD_FILE: MSMg01no312_h19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:34 2005
(320 letters)
>mm_chr9_22675787_22676506
Length = 720
Score = 586 bits (303), Expect = e-172
Identities = 312/315 (99%), Gaps = 2/315 (0%)
Strand = Plus / Plus
Query: 5 gaattcacagggaacagagaagtaaaatacaacactgaattggagacccaatactgtaca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacagggaacagagaagtaaaatacaacactgaattggagacccaatactgtaca 264
Query: 65 gaaggacatttcatttctgcctcgctgagttttaaagctgtataatggcgccaagttaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaaggacatttcatttctgcctcgctgagttttaaagctgtataatggcgccaagttaat 324
Query: 125 gtttccacattatgcacagtagtgggtaacatgagaatggaggtgatagattggtatatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtttccacattatgcacagtagtgggtaacatgagaatggaggtgatagattggtatatg 384
Query: 185 tcctccaatgttggtctgggaatggtggtgcatgccgt-caaccctagcacctagaagag 243
|||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 385 tcctccaatgttggtctgggaatggtggtgcatgcc-tgcaaccctagcacctagaagag 443
Query: 244 tgaggcagaaggatcaagagttcaaggctaccctggtcagcatagtgatatccaatctta 303
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 444 tgaggcagaaggatcaagagttcaaggctaccctggccagcatagtgatatccaatctta 503
Query: 304 aaagtgaaaaacaac 318
|||||||||||||||
Sbjct: 504 aaagtgaaaaacaac 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no312_h19.g1 MSMg01no312_h19.g1 CHROMAT_FILE:
MSMg01no312_h19.g1 PHD_FILE: MSMg01no312_h19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:34 2005
(285 letters)
>mm_chr9_22842915_22843599
Length = 685
Score = 507 bits (262), Expect = e-148
Identities = 280/286 (97%), Gaps = 2/286 (0%)
Strand = Plus / Minus
Query: 1 tgggagacacagcccaggcaataccaagacttatgtggcagtggaagactgagagaccgt 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 485 tgggagacacagcccaggcaataccaaaacttatgtggcagtggaagactgagagaccgt 426
Query: 61 gagaaccaagacatgtccaatgggaatgagagcagtggttcaggaagaaaagatagcatc 120
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 425 gagaaccaagacatgtccaatgggaatgagagccgtggttcagtaagaaaagatagcatc 366
Query: 121 taatggactggtgaagaggaggggtcc-tgggttaaggttgcaaggtgcagtctgggtgc 179
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 365 taatggactggtgaagaggagggg-ccttgggttaaggttgcaaggtgcagtctgggtgc 307
Query: 180 cgaaacccacgaccaacaaagatgctggagtagagcatgaggaaagaaaaatgtcttatg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 cgaaacccacgaccaacaaagatgctggagtagagcatgaggaaagaaaaatgtcttatg 247
Query: 240 ggagttgaatggagggagaactagactggcttccgagtgcatgtga 285
||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 246 ggagttgaatggagggagaactagactggcttctgagtgcatgtga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
