TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAACATAAAGTCTTCAACTCTGAGAGTGCTAAAGCAAGAGGTAGAG
AGAACCCGAAAATACATAGGCTACAGCAAGAACGTTTTTTTCTTTTTTTT
AATTGATTAAGTTACTTATTTACTTTACATCCCAATCACAGCCTCTCCTC
CCTCCTCTCCTCTCAATCTCTCCCTCTCATCTCACCTCTCAGCTCTCCTC
CCCTTCTCCTCAGAAAAGGGGAGACCTCCCATGGATATAAACCAGTCTTG
ACATATCAAGTTGCAGTCTCTATTGGGGCTAGACAAGGCAGCACAGTTAG
GGCAAAGAGATCTAAAGGTAGGCTACAGAGTCAGAGACAGCCCCTGATAC
TGCTGTTAGGGGCCCCACAGGAAGACCAAGCTGCATGATACATGTGTATA
GAAACAGGCCTAGGTCAGTCCCATGCATGCTCTCTGGTTGGTAGTTCAAT
CTCTGTGAGCCCTGTGGGCTCAGGTTATTTGATTGTGTGGGTTTTCTAGC
ATCCTTGACCCCATGGCTCCTTTAATCACCACCCACACACACACACACAG
AGGATTCCCTAAGCTCCACCTAATGTTTGGCTGTGGGTCTCTGCATCTGT
TTCCATCAGCTGAGTGGAACCTCTCAGATGACAGTTATGCTAGGCTCCTG
TCTGCAATTATAGCAGAATACCATTAACAAAGTCAGAGGTGGGCTCACTC
AT

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTCTCCACTGAAATCTCTTGGGCCAGG
TCTGCACAGTTCAAATCACTCTCAGCAACAAAGTCTTGCATAGTCCTACT
AGGACAGCCTATTAAGCCCCACTTAAAACATTCCACTGATTCCCAAATCC
AAAGTCCCCAAATCCACATGCTTCCAAACAAAAGCATGGTCAGGCCTGTC
ACAGCAATACCCCAGACCCTGATACCAACATCTGTCTTACTGCTTTTGCT
GCTACAAACAGACACCATGACCAAGGCAACTCTTAAGGACAATATTTAAT
CAGGGCTGGCTTGCAGGTTCAGAGATTCAGTCCATTATCATCAAGGTGGG
AGCATGGCAGCATCCAGGCACCCATGGTGCAGGAAGAACTGAGAGTTGTA
CATCTTCATCTGAAGGCAGTTAGGAGAAGACTGACTTCTAGGCAGCTAGG
ATGAGAGTCTTAAAGCCCAGGCTCACAATGACACATTTACCAACATGGCC
ACACCTTCTAATAGTGCCACTCTCCTGGGCTAAGCATATACAAACCATCA
CAATGTATATTTTAGGAAGTAGTAGGTTTCCCAAGACTTCTAAAGTTAGT
GTTTGTTGTCCCTCCCCATATTCCACCCTCTCCAATTCTCTTCCCTTCAT
CTTCCTTTTTAATGTTTTGGGTTATAATTCCCTTGTCCCTTTCTAACACA

Query= MSMg01no322_a22.b1 MSMg01no322_a22.b1 CHROMAT_FILE:
MSMg01no322_a22.b1 PHD_FILE: MSMg01no322_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:56 2005
         (664 letters)



>mm_chr9_82575117_82576182
          Length = 1066

 Score = 1127 bits (583), Expect = 0.0
 Identities = 644/667 (96%), Gaps = 9/667 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcaacataaagtcttcaactctgagagtgctaaagcaagaggtagagagaacccg 63
           |||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaacataatgtcataaactctgagagtgctaaagcaagaggtagagagaacccg 263

                                                                       
Query: 64  aaaatacataggctaca-gcaagaacgtttttttc--ttttttttaattgattaagttac 120
           ||||||||||||||| | |||||||| ||||||||  |||||||||||||||||||||||
Sbjct: 264 aaaatacataggcta-atgcaagaacttttttttcttttttttttaattgattaagttac 322

                                                                       
Query: 121 ttatttactttacatcccaatcacagcctctcctccctcctctcctctcaatctctccct 180
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ttatttactttacattccaatcacagcctctcctccctcctctcctctcaatctctccct 382

                                                                       
Query: 181 ctcatctcacctctcagctctcctccccttctcctcagaaaaggggagacctcccatgga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctcatctcacctctcagctctcctccccttctcctcagaaaaggggagacctcccatgga 442

                                                                       
Query: 241 tataaaccagtcttgacatatcaagttgcagtctctattggggctagacaaggcagcaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tataaaccagtcttgacatatcaagttgcagtctctattggggctagacaaggcagcaca 502

                                                                       
Query: 301 gttagggcaaagagatctaaaggtaggctacagagtcagagacagcccctgatactgctg 360
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 503 gttagggcaaagagatctaaaggtaggctaccgagtcagagacagcccctgatactgctg 562

                                                                       
Query: 361 ttaggggccccacaggaagaccaagctgcatgatacatgtgtatagaaacaggcctaggt 420
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 563 ttaggggccccacaggaagaccaaggtgcatgatacatgtgtatagaaacaggcctaggt 622

                                                                       
Query: 421 cagtcccatgcatgctctctggttggtagttcaatctctgtgagccctgtgggctcaggt 480
           ||||||||| |||||||||||||||||||||  |||||||||||||||||||||||| ||
Sbjct: 623 cagtcccatacatgctctctggttggtagtttgatctctgtgagccctgtgggctcaagt 682

                                                                       
Query: 481 tatttgattgtgtgggttttctagcatccttgaccccatggctcctttaatcaccaccca 540
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tatttgattgtgtaggttttctagcatccttgaccccatggctcctttaatcaccaccca 742

                                                                       
Query: 541 cacacacacacacagaggattccctaagctccacctaatgtttggctgtgggtctctgca 600
           ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 cacacacacaca--gaggattccctaagctccacctaatgtttggctgtgggtctctgca 800

                                                                       
Query: 601 tctgtttccatcagctg---agtggaacctctcagatgacagttatgctaggctcctgtc 657
           |||||||||||||||||   |||||||||||||||||||||| |||||||||||||| ||
Sbjct: 801 tctgtttccatcagctgctgagtggaacctctcagatgacagctatgctaggctcctatc 860

                  
Query: 658 tgcaatt 664
           |||||||
Sbjct: 861 tgcaatt 867


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1066
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1056
Effective search space:   690624
Effective search space used:   690624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)