Query= MSMg01no328_d07.b1 MSMg01no328_d07.b1 CHROMAT_FILE:
MSMg01no328_d07.b1 PHD_FILE: MSMg01no328_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:17 2005
(249 letters)
>mm_chr9_47486503_47487151
Length = 649
Score = 482 bits (249), Expect = e-140
Identities = 249/249 (100%)
Strand = Plus / Minus
Query: 1 gctggccttaactcacaaagattgacctgcctgcctcctgaatactgggatgaaaggtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 gctggccttaactcacaaagattgacctgcctgcctcctgaatactgggatgaaaggtgt 468
Query: 61 gaggcaccatgtctggctcttctgatttttctttatggaaaaaggagtgaaaagtattga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gaggcaccatgtctggctcttctgatttttctttatggaaaaaggagtgaaaagtattga 408
Query: 121 ggtgggtggcggcctgtggggcacacaaaacaggttatagcaaagctgtcaactaaagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ggtgggtggcggcctgtggggcacacaaaacaggttatagcaaagctgtcaactaaagtg 348
Query: 181 tgcatttactttctaggttcatagtcacggtgagtttctttgcttgctggattattttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 tgcatttactttctaggttcatagtcacggtgagtttctttgcttgctggattattttaa 288
Query: 241 accatggga 249
|||||||||
Sbjct: 287 accatggga 279
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no328_d07.g1 MSMg01no328_d07.g1 CHROMAT_FILE:
MSMg01no328_d07.g1 PHD_FILE: MSMg01no328_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:13:17 2005
(423 letters)
>mm_chr9_47320926_47321749
Length = 824
Score = 774 bits (400), Expect = 0.0
Identities = 418/424 (98%), Gaps = 1/424 (0%)
Strand = Plus / Plus
Query: 1 taggtttctataaaagggtctagagatggccgtctgctagatgtggtttgatggcttgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taggtttctataaaagggtctagagatggccgtctgctagatgtggtttgatggcttgcc 260
Query: 61 ataaaaattctgtttgcaaggtaagcatattgatttcacttagatattgacttgaaaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataaaaattctgtttgcaaggtaagcatattgatttcacttagatattgacttgaaaagt 320
Query: 121 tttgtggggttgttctgtggatgttctgggcaaccctcctcataacctatcctatctatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgtggggttgttctgtggatgttctgggcaaccctcctcataacctatcctatctatt 380
Query: 181 ccccagtac-gtcactggcatgggagaatttgacagtcccaattcatccttctaatacat 239
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccccagtaccgtcactggcatgggagaatttgacagtcccaattcatccttctaatacat 440
Query: 240 caggacaatagggaagacatcctacgcttctcttaactcccctcatttttctctgccttc 299
|||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 caggacaaaagggaagacatccgacgcttctcttaactcccctcatttttctctgccttc 500
Query: 300 cagataatgccccagttttatgttaatgaataaaaagtattagttctacaattccataaa 359
|||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||
Sbjct: 501 cagataatgccccagttttatgttaatgaagaaaatgtattagttctataattccataaa 560
Query: 360 aaggacgtacaatgcagttgtgattgcatattggagttcattcagactcaagccaaccta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaggacgtacaatgcagttgtgattgcatattggagttcattcagactcaagccaaccta 620
Query: 420 tgag 423
||||
Sbjct: 621 tgag 624
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 824
Length adjustment: 9
Effective length of query: 414
Effective length of database: 815
Effective search space: 337410
Effective search space used: 337410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
