Query= MSMg01no330_b14.b1 MSMg01no330_b14.b1 CHROMAT_FILE:
MSMg01no330_b14.b1 PHD_FILE: MSMg01no330_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:45 2005
(314 letters)
>mm_chr9_45595496_45596212
Length = 717
Score = 520 bits (269), Expect = e-152
Identities = 301/313 (96%), Gaps = 3/313 (0%)
Strand = Plus / Minus
Query: 5 gaattcttccttccccctgtacttggtctaaccattttattttgtcacccctgtaccatg 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 517 gaattcttccttcccaatgtacttggtctaaccattttattttgtcacccctgtaccacg 458
Query: 65 gccttgctgacccccccctcagtgagtttagatcatcgccttctctttgcgactagcagt 124
||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 457 gccttgctgacccaggcctcagtgagtttagatcatcgccttctctttgcaactagcagt 398
Query: 125 gcaggctctgggcagcaggccaggttcttagggtacct---ccccccccgccctgtttct 181
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 397 gcaggctctgggcagcaggccaggttcttagggtacctcccccccccccgccctgtttct 338
Query: 182 ggctcttatctatgtatatagtgaccatatttatgtatctcctgtttcagctgtgggtca 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ggctcttatctatgtatatagtgaccatatttatgtatctcctgtttcagctgtgggtca 278
Query: 242 tgggcttagctagagcttaggaagtttcattctacttacagacctgtcctgtgtctcagc 301
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 277 tgggcttagctagagcttaggaagtttcattctacagacagacctgtcctgtgtctcagc 218
Query: 302 agcccctgtcctc 314
|||||||||||||
Sbjct: 217 agcccctgtcctc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 717
Length adjustment: 9
Effective length of query: 305
Effective length of database: 708
Effective search space: 215940
Effective search space used: 215940
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no330_b14.g1 MSMg01no330_b14.g1 CHROMAT_FILE:
MSMg01no330_b14.g1 PHD_FILE: MSMg01no330_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:45 2005
(232 letters)
>mm_chr9_45418462_45419093
Length = 632
Score = 441 bits (228), Expect = e-128
Identities = 231/232 (99%)
Strand = Plus / Plus
Query: 1 ctgtgcattacggtgctaattctgtaatcccactgcattaatgttattaaatgtcactga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgtgcattacggtgctaattctgtaatcccactgcattaatgttattaaatgtcactga 260
Query: 61 gtgattgctttcccagtgtttaaattcttaatgcacttatcctttcaaaactttgggcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgattgctttcccagtgtttaaattcttaatgcacttatcctttcaaaactttgggcac 320
Query: 121 caatgtcaaaaaagaagaatcagtgaacaccctgttgtaaaatcgggtagtcgggagcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caatgtcaaaaaagaagaatcagtgaacaccctgttgtaaaatcgggtagtcgggagcct 380
Query: 181 ttctcaaagcttggatatctttcaagcatcttaaaggtaggcagctcagcct 232
||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttctcaaagcttggagatctttcaagcatcttaaaggtaggcagctcagcct 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 632
Length adjustment: 9
Effective length of query: 223
Effective length of database: 623
Effective search space: 138929
Effective search space used: 138929
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
