Query= MSMg01no331_f24.b1 MSMg01no331_f24.b1 CHROMAT_FILE:
MSMg01no331_f24.b1 PHD_FILE: MSMg01no331_f24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:16 2005
(673 letters)
>mm_chr9_24348175_24349247
Length = 1073
Score = 1249 bits (646), Expect = 0.0
Identities = 664/670 (99%)
Strand = Plus / Minus
Query: 4 gaattctttgtttacctctgagccccatttttaatggggttatttgattttctggagtac 63
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 917 gaattctttgtttagctctgagccccatttttaatggggttatttgattttctggattac 858
Query: 64 accttcttgagttctttatatatattggatattagtcccctatctgatttaggataggta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 accttcttgagttctttatatatattggatattagtcccctatctgatttaggataggta 798
Query: 124 aagatcctttccaaatctgttggtggcctttttaagcagaatatacttacatggtctgaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 aagatcctttccaaatctgttggtggcctttttaagcagaatatacttacatggtctgaa 738
Query: 184 acaccacagattttagatgtcagaaatttcaaaataattgttccacaccaccaaaaacag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 acaccacagattttagatgtcagaaatttcaaaataattgttccacaccaccaaaaacag 678
Query: 244 ccttggattagctagaaaataaataggatatgactcagttaaaaatattcaatgctatag 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 677 ccttggattagctagaaaataaataggatatgactcagttaaaaatattcaatgctatgg 618
Query: 304 gtagaagagcacgactaaatcatgtgagatgcaccagtgtgctgggaagagggaatggca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gtagaagagcacgactaaatcatgtgagatgcaccagtgtgctgggaagagggaatggca 558
Query: 364 agacaagcacagccctttacagttctgttcattaacaaggaattaaatttgataacaccg 423
||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 557 agacaaggaaagccctttacagttctgttcattagcaaggaattaaatttgataacaccg 498
Query: 424 tgacactgttatacctaaaacatcagagtactacatatcctaaatctaaaaataattcta 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tgacactgttatacctaaaacatcagagtactacatatcctaaatctaaaaataattcta 438
Query: 484 aaaaaaccaaaccaaacaaaaaaacttccctttagtctctttgaagatatagacaatttt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aaaaaaccaaaccaaacaaaaaaacttccctttagtctctttgaagatatagacaatttt 378
Query: 544 attcctaaacattatcctcagctaacttgagacccatgctatgtgagagagccaatccct 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 attcctaaacattatcctcagctaacttgagacccatgctatgtgagagagccaatccct 318
Query: 604 gacattgctaaaaatattctgctatgcttgcagagaggagcctagcataattgtctcctg 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gacattgctaaaaatattctgctatgcttgcagagaggagcctagcataattgtctcctg 258
Query: 664 agaggcttca 673
||||||||||
Sbjct: 257 agaggcttca 248
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no331_f24.g1 MSMg01no331_f24.g1 CHROMAT_FILE:
MSMg01no331_f24.g1 PHD_FILE: MSMg01no331_f24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:16 2005
(647 letters)
>mm_chr9_24185154_24186200
Length = 1047
Score = 1181 bits (611), Expect = 0.0
Identities = 635/643 (98%), Gaps = 1/643 (0%)
Strand = Plus / Plus
Query: 4 ttatacatgggatggtgtctgctccccaggtggcctgacatcaaggagttaaatttgtaa 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ttatacatgggatggtgtctgctccccaggtggcctgacatcaaggagttaaatttgtaa 262
Query: 64 tctggagagcttcactgccagcatgtggggccttacaaatgaaaaagggactaaactagt 123
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 263 tctggagagcttcactgccagcatgtggggccttacaattgaaaaagggactaaactagt 322
Query: 124 gcagtcaggctgcc-tccttaatattgctgttttcaaagaggaaaagaggagcctcaaac 182
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gcagtcaggctgccctccttaatattgctgttttcaaagaggaaaagaggagcctcaaac 382
Query: 183 aaaggggagtgtcctttagatgctgagaaagctaagggtgttgtttctccttaaaatttc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aaaggggagtgtcctttagatgctgagaaagctaagggtgttgtttctccttaaaatttc 442
Query: 243 caaaaggaaagcaccttatgatgatgccttaactcagtgagcctgcctgagacgtctgct 302
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 443 caaaaggaaagcaccttatgatgatgccttaactcagtgagcctgcctgagatgtctgct 502
Query: 303 ctcaagagctgtgtgatattaaatgtgtgcagttttgagcccccgcatctgtggacatca 362
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 503 ctcaagagctgtgtgatattaaatgtgtgcagttttgagcccctgcatctgtggacatta 562
Query: 363 attatggcagcaacaggaagtgaaagaagtcctctgtctagcatttgtgctttggatggg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 attatggcagcaacaggaagtgaaagaagtcctctgtctagcatttgtgctttggatggg 622
Query: 423 agagtccagattctggatactgtcataaattgagccatactcagtagaattctacccact 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 agagtccagattctggatactgtcataaattgagccatactcagtagaattctacccact 682
Query: 483 agatgccagtgaagcctcctcttgaagtaataataatgatacttttcccagacactactg 542
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 agatgccagtgaagccttctcttgaagtaataataatgatacttttcccagacactactg 742
Query: 543 ggaaggtggtgttagtgaccaaggtcattcatcttaatataagcgagccattggacatgt 602
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ggaaggtggggttagtgaccaaggtcattcatcttaatataagcgagccattggacatgt 802
Query: 603 ggcatctctccccacacacgaaactcttgtcactgatacctta 645
||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 803 ggcatatctccccacacacgaaactcttgtcactgatacctta 845
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
