Query= MSMg01no334_o06.b1 MSMg01no334_o06.b1 CHROMAT_FILE:
MSMg01no334_o06.b1 PHD_FILE: MSMg01no334_o06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:28 2005
(557 letters)
>mm_chr9_13612881_13613836
Length = 956
Score = 1038 bits (537), Expect = 0.0
Identities = 549/553 (99%), Gaps = 1/553 (0%)
Strand = Plus / Plus
Query: 5 gaattctgtatgttcccgcatgtccttcagtaactgaagatttttcctgcttttttctcc 64
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtatggtct-gcatgtccttcagtaactgaagatttttcctgcttttttctcc 263
Query: 65 aggtctctgtttggccagatccttcttacttgcggtccttgggactccagatgaacgacc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aggtctctgtttggccagatccttcttacttgcggtccttgggactccagatgaacgacc 323
Query: 125 gctgctgttcccttcttcatcaagagtctttttgttagcttttaattccttcttctgctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gctgctgttcccttcttcatcaagagtctttttgttagcttttaattccttcttctgctt 383
Query: 185 atctatgttttgtttctccagctgaccaaataatcaaaacagggaaaaaatgaattcaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atctatgttttgtttctccagctgaccaaataatcaaaacagggaaaaaatgaattcaat 443
Query: 245 aaaaacattttcttttagctttgtttttgatacgaggtcttgctatgttcagtcttaaac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaaaacattttcttttagctttgtttttgatacgaggtcttgctatgttcagtcttaaac 503
Query: 305 tcttgattcttctgcctcaacttcttaagtacaccattgacttaaataatcttcctctaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcttgattcttctgcctcaacttcttaagtacaccattgacttaaataatcttcctctaa 563
Query: 365 cactcaagtgacagattctaggtgggtttttttaaaagcacatagatctgcagaagttat 424
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cactcaagtgatagattctaggtgggtttttttaaaagcacatagatctgcagaagttat 623
Query: 425 aaatcacatatgtaaaatacacagccaggtaaataagtgctatataaatactgtaaaagt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aaatcacatatgtaaaatacacagccaggtaaataagtgctatataaatactgtaaaagt 683
Query: 485 ctccttaaggagagagggacaggcttcgaattctccctgcttgaccagactgtaaactct 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ctccttaaggagagagggacaggcttcgaattctccctgcttgaccagactgtaaactct 743
Query: 545 aacagctactagt 557
|||||||||||||
Sbjct: 744 aacagctactagt 756
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 557
Length of database: 956
Length adjustment: 10
Effective length of query: 547
Effective length of database: 946
Effective search space: 517462
Effective search space used: 517462
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no334_o06.g1 MSMg01no334_o06.g1 CHROMAT_FILE:
MSMg01no334_o06.g1 PHD_FILE: MSMg01no334_o06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:28 2005
(327 letters)
>mm_chr9_13785133_13785859
Length = 727
Score = 601 bits (311), Expect = e-176
Identities = 323/327 (98%)
Strand = Plus / Minus
Query: 1 aattctttccttccatgcagttccaagagggatcactgactaatcttcagctttggggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 aattctttccttccatgcagttccaagagggatcactgactaatcttcagctttggggga 468
Query: 61 tcatttatctataagatgcatgctggcttcactatctttcccttggcttgctgagaatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tcatttatctataagatgcatgctggcttcactatctttcccttggcttgctgagaatca 408
Query: 121 ccaggctctgttagtcaaagcagatataaatatctccaggctcaataagaagagatggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ccaggctctgttagtcaaagcagatataaatatctccaggctcaataagaagagatggat 348
Query: 181 gtatgccttgtttcttgggagaggaataattaatgtgtggttgtgtcatctctacacatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 347 gtatgccttgtttcttgggagaggaataattaatgtgtggttgtgtcatctttacacatc 288
Query: 241 cacgatcatcgttagcaccatctgttatttaatatactctataccccaaattcacttacc 300
||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 287 cacaatcatctttagcaccatctattatttaatatactctataccccaaattcacttacc 228
Query: 301 tcctcctttgtaaatgccccaaccaac 327
|||||||||||||||||||||||||||
Sbjct: 227 tcctcctttgtaaatgccccaaccaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
