Query= MSMg01no337_a08.b1 MSMg01no337_a08.b1 CHROMAT_FILE:
MSMg01no337_a08.b1 PHD_FILE: MSMg01no337_a08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:15 2005
(567 letters)
>mm_chr9_33090969_33091934
Length = 966
Score = 1073 bits (555), Expect = 0.0
Identities = 561/563 (99%), Gaps = 1/563 (0%)
Strand = Plus / Plus
Query: 5 gaattctctttctcatgagctgccagtgtatgctaaagtgacttcagggtcttagaagta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctttctcatgagctgccagtgtatgctaaagtgacttcagggtcttagaagta 264
Query: 65 catcatctcacttaacccttggaggcagacattactttgcacatatggccgaggagaaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 catcatctcacttaacccttggaggcagacattactttgcacatatggccgaggagaaac 324
Query: 125 tggtacacacaggtagagattcacatatatttatttatttgtatacagtcttgtgatcac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tggtacacacaggtagagattcacatatatttatttatttgtatacagtcttgtgatcac 384
Query: 185 aaggcagtcaggatgtctgattgccatgcatgctgtcatctacaatgctcaacagtctcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaggcagtcaggatgtctgattgccatgcatgctgtcatctacaatgctcaacagtctcc 444
Query: 245 caaaagctaactcacccttaggagtggagagaggcgggtttcaggttcacagaaacatca 304
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caaaagctaactcaccctgaggagtggagagaggcgggtttcaggttcacagaaacatca 504
Query: 305 cagttctgtgttggctttgtagacaagtgtgtacttcacaccagacgcaacatgtctaca 364
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 505 cagttctgtgttggctttgtagaca-gtgtgtacttcacaccagacgcaacatgtctaca 563
Query: 365 caaagtgaagaaaagctaagaagcacatcaattgttaatcaagaatatgccctacagact 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 caaagtgaagaaaagctaagaagcacatcaattgttaatcaagaatatgccctacagact 623
Query: 425 agcctacagacaatctgctggatggagtgagatccatggccttcaaatggaaatagagca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agcctacagacaatctgctggatggagtgagatccatggccttcaaatggaaatagagca 683
Query: 485 tgcattccaagatggccatctaattctgatcctctgtttgctccactgctgttttaacac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgcattccaagatggccatctaattctgatcctctgtttgctccactgctgttttaacac 743
Query: 545 cttgaccagaacaacttggggga 567
|||||||||||||||||||||||
Sbjct: 744 cttgaccagaacaacttggggga 766
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 966
Length adjustment: 10
Effective length of query: 557
Effective length of database: 956
Effective search space: 532492
Effective search space used: 532492
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_a08.g1 MSMg01no337_a08.g1 CHROMAT_FILE:
MSMg01no337_a08.g1 PHD_FILE: MSMg01no337_a08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:16 2005
(140 letters)
>mm_chr9_33284403_33284942
Length = 540
Score = 259 bits (134), Expect = 4e-74
Identities = 137/138 (99%)
Strand = Plus / Minus
Query: 1 ttttcttgccatttagtggttgggtagctttgggcatcatttaagtatctgaaacctggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ttttcttgccatttagtggttgggtagctttgggcatcatttaagtatctgaaacctggt 247
Query: 61 ttcttatttaatttctagtgggtaagtgaaaactgtgatgtaaggagtgtgtgtatgtgt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 246 ttcttatttaatttctagtgggtaagtgaaaactgtgatgtaaggagtgtgtgtgtgtgt 187
Query: 121 gtgtgtgtgtgtgtgtgt 138
||||||||||||||||||
Sbjct: 186 gtgtgtgtgtgtgtgtgt 169
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 140
Length of database: 540
Length adjustment: 8
Effective length of query: 132
Effective length of database: 532
Effective search space: 70224
Effective search space used: 70224
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
