Query= MSMg01no337_m07.b1 MSMg01no337_m07.b1 CHROMAT_FILE:
MSMg01no337_m07.b1 PHD_FILE: MSMg01no337_m07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:14 2005
(472 letters)
>mm_chr9_31942146_31943017
Length = 872
Score = 864 bits (447), Expect = 0.0
Identities = 462/467 (98%)
Strand = Plus / Minus
Query: 5 gaattcagtaattttctgtgtgtgttgaatgtaacactttaatacagagtgagtgtacta 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 gaattcagtaattttgtgtgtgtgttgaatgtaacactttaatacagagtgagtgtacta 612
Query: 65 ttaacaaaaataatgctgtcttctattcacaaattcaatgtagatctacaggaagttata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ttaacaaaaataatgctgtcttctattcacaaattcaatgtagatctacaggaagttata 552
Query: 125 aaactataaggaagaattatgaaagacaataatggacaaacaaatcactaaatacccttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aaactataaggaagaattatgaaagacaataatggacaaacaaatcactaaatacccttt 492
Query: 185 tgatggaatgctgttgcctccaggaattacttgaattagtattgaattttgactatttta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tgatggaatgctgttgcctccaggaattacttgaattagtattgaattttgactatttta 432
Query: 245 aacatagtaaaaatggaattcaatttacagaatattgatagtaattcaaatagtctcaag 304
|||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||
Sbjct: 431 aacatagtaaaaatggaattcaatttacagaaaactgaaagtaattcaaatagtctcaag 372
Query: 305 ttaaaagagatacaaattgtgtcccctggaatggagcagtctgcatccatgtgcacgtgc 364
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 371 ttaaaagagatacaaattgtgtcccctagaatggagcagtctgcatccatgtgcacgtgc 312
Query: 365 tgtagcaccagacaatgtaaatgaagctgctttggatctctagagcagttttaatgtctg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tgtagcaccagacaatgtaaatgaagctgctttggatctctagagcagttttaatgtctg 252
Query: 425 acagcaaacatgtcaccttgacaagatctgaaatcaactgaaaggca 471
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 acagcaaacatgtcaccttgacaagatctgaaatcaactgaaaggca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space: 398244
Effective search space used: 398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_m07.g1 MSMg01no337_m07.g1 CHROMAT_FILE:
MSMg01no337_m07.g1 PHD_FILE: MSMg01no337_m07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:15 2005
(326 letters)
>mm_chr9_31778992_31779717
Length = 726
Score = 586 bits (303), Expect = e-172
Identities = 321/327 (98%), Gaps = 2/327 (0%)
Strand = Plus / Plus
Query: 1 cagaagggccagagtgacatagagagactgtctcaaaaaaagagcaacaaggaaaatacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagaagggccagagtgacatagagagactgtctcaaaaaaagagcaacaaggaaaatacc 260
Query: 61 agaatctagacaaataagagcaaccttaggg-tgaggaaagtagtgtgtgctgggggtgt 119
||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||
Sbjct: 261 agaatctagacaaataagagcaacctt-gggatgaggaaaaaagtgtgtgctgggggtgt 319
Query: 120 ggaactagctttccttcatagaaggaaagggtagccagtggaggataccattaatttggg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ggaactagctttccttcatagaaggaaagggtagccagtggaggataccattaatttggg 379
Query: 180 aagtagagaaaaactgtgtcttcctcagcattttacagaggttcaagccttggtagtgct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aagtagagaaaaactgtgtcttcctcagcattttacagaggttcaagccttggtagtgct 439
Query: 240 ctccccttggatctgggcagctgtcagaaaatcagtggggaggaggaacaaacatatgtc 299
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 440 ctccccttggatctggacagctgtcagaaaatcaatggggaggaggaacaaacatatgtc 499
Query: 300 aagacacaggcagcatctaactgcaaa 326
|||||||||||||||||||||||||||
Sbjct: 500 aagacacaggcagcatctaactgcaaa 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|