Query= MSMg01no340_g03.b1 MSMg01no340_g03.b1 CHROMAT_FILE:
MSMg01no340_g03.b1 PHD_FILE: MSMg01no340_g03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:23 2005
(276 letters)
>mm_chr9_120401222_120401897
Length = 676
Score = 476 bits (246), Expect = e-139
Identities = 264/270 (97%)
Strand = Plus / Plus
Query: 5 gaattcccaggtggtacccacaagggttctgcaaggaactcagggatctcgggaaccctg 64
|||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 205 gaattcccaggtggcacccacaagggttctgcaaggaactcaggggtctcgggaaccctg 264
Query: 65 ggggctggggagggcggcggaggcgcagagcgcggcccccgctggttgcaagtccagacc 124
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 265 ggggctggggagggcggcggaggcgcagagcgcggtccccgctggttgcaagtccagacc 324
Query: 125 cccgggggcacgtttctcgccgttgcacccggaagcgcctccgcccggcgcctcgggcgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cccgggggcacgtttctcgccgttgcacccggaagcgcctccgcccggcgcctcgggcgg 384
Query: 185 gacggaccgcggctgcccgcagtgggctcccacccgctcctcgctcgcccccggctcggc 244
||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct: 385 gacggaccgcggctgcccgcagtgggctcccgcccgctcctcgctggcccccggctcggc 444
Query: 245 gctcccgggcggacgcgcggtgcgtgcgga 274
||||| ||||||||||||||||||||||||
Sbjct: 445 gctccggggcggacgcgcggtgcgtgcgga 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 676
Length adjustment: 9
Effective length of query: 267
Effective length of database: 667
Effective search space: 178089
Effective search space used: 178089
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no340_g03.g1 MSMg01no340_g03.g1 CHROMAT_FILE:
MSMg01no340_g03.g1 PHD_FILE: MSMg01no340_g03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:23 2005
(248 letters)
>mm_chr9_120584575_120585223
Length = 649
Score = 443 bits (229), Expect = e-129
Identities = 244/249 (97%), Gaps = 1/249 (0%)
Strand = Plus / Minus
Query: 1 tcatcttggcacagaggtctgctgggtgtgtggggcacaatttacctgctgtcactgccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 449 tcatcttggcacagaggtctgctgggtgtgtggggcacaatttacctgctgtcacagccg 390
Query: 61 tgaaatcacggattctgccgctgcaaggggcgggggctggggtttagatgccgcagggtg 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 389 tgaaatcccggattctgccgctgcaaggggcgggggctggggtttagatgccgcacggtg 330
Query: 121 gctgggggtgtttggctccttgctttatcgttgttgctgttattacttggtttgtttggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gctgggggtgtttggctccttgctttatcgttgttgctgttattacttggtttgtttggg 270
Query: 181 ttggatctga-tttcattcgcagctctgatattctacaattctcagccacagaactgcag 239
|||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 269 ttggatctgattttcattcgcagctctgaaattctacaattctcagccacagaactgcag 210
Query: 240 tcctcttgg 248
|||||||||
Sbjct: 209 tcctcttgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 649
Length adjustment: 9
Effective length of query: 239
Effective length of database: 640
Effective search space: 152960
Effective search space used: 152960
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
