Query= MSMg01no341_b02.b1 MSMg01no341_b02.b1 CHROMAT_FILE:
MSMg01no341_b02.b1 PHD_FILE: MSMg01no341_b02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:13 2005
(467 letters)
>mm_chr9_32480271_32481137
Length = 867
Score = 851 bits (440), Expect = 0.0
Identities = 455/464 (98%), Gaps = 7/464 (1%)
Strand = Plus / Minus
Query: 4 ggaattccaacttgtaaagcagtttgcttgctttggaggctgaggtttaaatgccacctg 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 ggaattccaacttgcaaagcagtttgcttgctttggaggctgaggtttaaatgccacctg 802
Query: 64 aaagggtgaatagagtttgtggaaatctgttttattaagaagcaagagtcttcaaaggcc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aaagggtgaatagagtttgtggaaatctgttttattaagaagcaagagtcttcaaaggcc 742
Query: 124 ataggtaaggcttaataggatgctcaggaataggaagcccatccatattaaaaaacaaaa 183
||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 741 ataggtaaggcttaataggatgctcaggaataggaagcccatccatatt-------aaaa 689
Query: 184 aacaaaaaacaaacaaacaaaaaaccacagtgatgcagagaagagagagccagccctcca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 aacaaaaaacaaacaaacaaaaaaccacagtgatgcagagaagagagagccagccctcca 629
Query: 244 gacagtgagatagggcagggtctgaactgaaaggcagaggctatgcacaggggcgagttc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gacagtgagatagggcagggtctgaactgaaaggcagaggctatgcacaggggcgagttc 569
Query: 304 tgagggccaaaggctgcccagggagaggtgatctctcccatagtgtaattaggcctcctg 363
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 568 tgagggccaaaggctgcccagggagaggtgatctctcccatagtgcaattaggcctcctg 509
Query: 364 tttgacccctgacttttgccccacaggatatttatggtctctggacaggcagctaggggg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 tttgacccctgacttttgccccacaggatatttatggtctctggacaggcagctaggggg 449
Query: 424 caaatgaagggatatagactctgaaggcccttagtagggaaaga 467
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 caaatgaagggatatagactctgaaggcccttagtagggaaaga 405
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no341_b02.g1 MSMg01no341_b02.g1 CHROMAT_FILE:
MSMg01no341_b02.g1 PHD_FILE: MSMg01no341_b02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:13 2005
(376 letters)
>mm_chr9_32296004_32296779
Length = 776
Score = 712 bits (368), Expect = 0.0
Identities = 374/376 (99%)
Strand = Plus / Plus
Query: 1 tcagttaagagggcagaattgggtcccacgggcaagtttggctcaggtgagttgtacttg 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 tcagttaagagggcagaattgggtcccacaggcaagtttggctcaggtgagttgtacttg 260
Query: 61 ggaggttgctgacacacagtagaagatgtgatttctgtcttgctgttgggctttgtcctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaggttgctgacacacagtagaagatgtgatttctgtcttgctgttgggctttgtcctg 320
Query: 121 cctgttttctccagatggcagtagcagtcatatgaaataccagagaactggttgtttgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctgttttctccagatggcagtagcagtcatatgaaataccagagaactggttgtttgtc 380
Query: 181 tcccccaaagcccaatcaagacctgaagagataacagaagactctgaagatgggaggaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcccccaaagcccaatcaagacctgaagagataacagaagactctgaagatgggaggaga 440
Query: 241 gaaggaggtagtgtagacctgccagcctgctctctcctcaggggcagaggcttgttcatc 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaggaggcagtgtagacctgccagcctgctctctcctcaggggcagaggcttgttcatc 500
Query: 301 aggggataacatgcttgctgccagtttgcttaaacattgaggagaggagataggataggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggggataacatgcttgctgccagtttgcttaaacattgaggagaggagataggataggt 560
Query: 361 ggctggaactctgggg 376
||||||||||||||||
Sbjct: 561 ggctggaactctgggg 576
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
