XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCCTTT
ATTCGCATTTCTAGTGTCTTATTTTCCTTAACTGACTTTTACTGTATCCC
TTTGAGTTCTTTTTCTAAGAGAAGGTCATATATGATGATTTCCTAGGAAA
CTTGTGGGATACATTTTTCTATTTGTCGAGAATTCAAGCAAATTGCCCAG
TGTGAAGCCTCGTTGCCTAAAGGACTGCAGCACAGAATTGCCAGGTTAAG
CAAGAAATGCCCTCAGGATCTCTCAACAGCCTGGTGTGTGTCAGGACACA
GCAGGGTTCTTGTGTTGTTGAAAGCATTCTATTCCAAAGGCACTTTTCAT
TTTTCAACGGAGAAGTGAGTTTAAAAGCAGCCAGATTTAAAACATGCCTT
GGTATGAAGTGTGTAGTATTCTCATGTATTTTTACCTGAAATCTTTTCCT
TAATTCATGCTCTGCCTTCCATCAAGAGCATAACCCCCATAGTGTTGAGG
ACTCCCTGGTTTTGGTCTTCCTGCCCTTCAGAGTAATGCGTGCACTAAAC
GCGGGCAATTCACGTATTTTTTGCCGATCCATTGATTGATCCTCCCCTGT
ACTACCTTTCCACTCGCTATATTTCCCCCCTTGTCATTTTTTCGTTCCTC
CGCCGTTCTCCCCTTTCCTTTATTTTTTTTTTTTCCCACCTATACTTCTC
CCTTCTTTCCCCGTCTTGCTCTGTTTTTTATTCTAN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTCCTCTGAAGAAACAGACTTGGAGGAGGAAGCAGAT
AGTTATGAGAGAAAAAAGTACCAGCCAGATAAAATGCTAGCTAATCAGTT
AAGGAAAAAGCCAAAAGCGGCTGGCCAAGGCCAGCATGCTGCTCGGCCTC
CGGGCAGTCGGCTTCAAGGTCATAGTGCACTTCCGCCCTATGCGGAGCCC
CCACACTGCGTAATGCATCAGCCCTGCGCAGAGAGGCAATGGACAGAGAG
GCAATGCACAGACTTGCTCATTCCCAGAGAGGAAAAAAGGAAAAAGCAAC
AGGCATTTCCGGTCTTTGAAGGAGCCGAGCGGTGGTGGCGCACGCCGCCA
TTAATCCCAGCACTTGGGAGACAGAGGCAGGCTCTTGCAGCCTACAAGGT
CTTATTGTCCACCCTGGAGTTGTAGATCAGGATGATAAAGGGGAACTTCA
GGGTCTCTGTTCTTGTCCTCAAGTTGTCTTTTCTATATCACAAGGGGGCA
GACTGGCTCAACTACTAATTTTGCCCAGCCTAACTGGCTGGTTACCTTCC
TCAGAAATTCTTCGAGTCGCCCGAACGGATTGGCTCTATCGGAAAAGATT
TCTATTAATTTAACCACTGGCCTTCAGAATTGTGGCCAACTCTAATTATG
TCTTTTGCTGCGGAATATTTCT

Query= MSMg01no342_f03.b1 MSMg01no342_f03.b1 CHROMAT_FILE:
MSMg01no342_f03.b1 PHD_FILE: MSMg01no342_f03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:48 2005
         (414 letters)



>mm_chr9_6187741_6188554
          Length = 814

 Score =  762 bits (394), Expect = 0.0
 Identities = 409/414 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttctagtgtcttattttccttaactgacttttactgtatccctttgagttctttttcta 60
           ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 201 tttctagtgtcttattttccttaactgacttttcctgtatcccttggagttctttttcta 260

                                                                       
Query: 61  agagaaggtcatatatgatgatttcctaggaaacttgtgggatacatttttctatttgtc 120
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 agagaaggtcatatatgatgatttcctaggaaacttgtggggtacatttttctatttgtc 320

                                                                       
Query: 121 gagaattcaagcaaattgcccagtgtgaagcctcgttgcctaaaggactgcagcacagaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagaattcaagcaaattgcccagtgtgaagcctcgttgcctaaaggactgcagcacagaa 380

                                                                       
Query: 181 ttgccaggttaagcaagaaatgccctcaggatctctcaacagcctggtgtgtgtcaggac 240
           ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct: 381 ttgccaggttaagcaagaaatgccctcaggagctctcaacagcctgatgtgtgtcaggac 440

                                                                       
Query: 241 acagcagggttcttgtgttgttgaaagcattctattccaaaggcacttttcatttttcaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acagcagggttcttgtgttgttgaaagcattctattccaaaggcacttttcatttttcaa 500

                                                                       
Query: 301 cggagaagtgagtttaaaagcagccagatttaaaacatgccttggtatgaagtgtgtagt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cggagaagtgagtttaaaagcagccagatttaaaacatgccttggtatgaagtgtgtagt 560

                                                                 
Query: 361 attctcatgtatttttacctgaaatcttttccttaattcatgctctgccttcca 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 attctcatgtatttttacctgaaatcttttccttaattcatgctctgccttcca 614


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space:   326025
Effective search space used:   326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)