CCGCTATACGACTCACTATTTCAAGAGGAGCCGCGGAATTCATTTCTTTA
CTGAAATGAGTAAGATTCATAGATGTTAAATAACTGACAACTAATATTAG
CACAACTCTTTAAAGATGTACAAAGAACATTCTTAAACATTTTCTCATTT
AAGCCTCACGTCAGCAGGGTGGGGCAGAGAGGAGACAAACCTTTTGTCTC
TCCCATTTTTCAGAGAAAGAAACGGAGCTACATTAGTTTAAGTAACGTTG
ATAAAGACAGCATACATGAGGTCAACCATCTGGGTTCTAGATTCATTTAA
TTTATTTTGTAATTGTGACATGCCTGCAATCGCCATGCGTGTGAAGGCTG
AAGCTAGTTTTTACTTCCTGCCTTCAGTCTTACTTACAATGCCAGCTGAG
TGTGAATTCACACTTCTTCTCTTCTAATTATTGCCTAATTTACTATAGTA
AGAAGCTGATAATGTTGACAGCTCTGCGTCTCTGATTCTGTCCGCCTGAA
CGCCTGTCTGCCTGTCTGCCTGTCCCCGAGTGAATGTGTGTGTGAGTGAT
TGTTCTTTTTGTATTTTCCTTCCTCGTCCCCGCCTATCTATTTTATACCC
ATATTTTCCCCTTCGCTTTTCTTTTCCCCCCGCCGTATCCATTAGTTCTA
CTCCTTACCCATACCACTATCTTCTACTCCTCGCTTTCCTTCCATCTCCC
ATCGCCATCTCTCGCAACCTTCTCTCTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXCAATTCGATAGCAACAGCACTGCAGGAAGTATTGATCTG
GCAAAAGCTGGAGGCCTTCCAGCAAGTTTGAGCCATCCTCTCACAGGTGC
CCATATGCAATTGACTTTACCAACTTCTTGCTTCAATGGAGCAAGCATGA
ACTCAGTAAAAACGGCTCTCCAATTAGCCTTTAGTCAGAGAGCAAGTAAG
AGGTTGGAAGAAGAGACATGTACCAGGGCTTAGAAAAAAAGGAAAAGCTA
GATACTAAATGTTTTTCTCTGGGACTCTACTACTGGACTCTTAGGTCTAT
TTTAAAGACATAATTATCAACCCAGACAAGCTATTTCTAAGGGACTCCTG
TATCATTTAAGATAGCCAAATTTGTTACGCAATAAGAAGATAGATGAGAT
TAGGATTTTTCAGCTTTGTTGGAGCAAACAAAATATTACTTGGATTTTCT
TCTGATATGAATTCAAAAGATTTTTATCCTAGATAATGATTTTTATACTG
ATAGAGATGATGAGAATATTTATAACAATATTCCATCTTGATTGCTATAG
GGTCTACACATTATCCTACAAAGTCTATTGTTTAAACATATTTTCATAGA
ACACCCGGTGAAAAGTCTTCTATACCCTTATTGCATTTTCCCAGCCCCTG
AATTATAAACTACCCC

Query= MSMg01no342_k02.b1 MSMg01no342_k02.b1 CHROMAT_FILE:
MSMg01no342_k02.b1 PHD_FILE: MSMg01no342_k02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:12 2005
         (385 letters)



>mm_chr9_27761256_27762040
          Length = 785

 Score =  729 bits (377), Expect = 0.0
 Identities = 383/385 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaatgagtaagattcatagatgttaaataactgacaactaatattagcacaactctttaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatgagtaagattcatagatgttaaataactgacaactaatattagcacaactctttaa 260

                                                                       
Query: 61  agatgtacaaagaacattcttaaacattttctcatttaagcctcacgtcagcagggtggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agatgtacaaagaacattcttaaacattttctcatttaagcctcacgtcagcagggtggg 320

                                                                       
Query: 121 gcagagaggagacaaaccttttgtctctcccatttttcagagaaagaaacggagctacat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcagagaggagacaaaccttttgtctctcccatttttcagagaaagaaacggagctacat 380

                                                                       
Query: 181 tagtttaagtaacgttgataaagacagcatacatgaggtcaaccatctgggttctagatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagtttaagtaacgttgataaagacagcatacatgaggtcaaccatctgggttctagatt 440

                                                                       
Query: 241 catttaatttattttgtaattgtgacatgcctgcaatcgccatgcgtgtgaaggctgaag 300
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 441 catttaatttattctgtaattgtgacatgcctgcaatcgccatgcgtgtgaaggcagaag 500

                                                                       
Query: 301 ctagtttttacttcctgccttcagtcttacttacaatgccagctgagtgtgaattcacac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctagtttttacttcctgccttcagtcttacttacaatgccagctgagtgtgaattcacac 560

                                    
Query: 361 ttcttctcttctaattattgcctaa 385
           |||||||||||||||||||||||||
Sbjct: 561 ttcttctcttctaattattgcctaa 585


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space:   291776
Effective search space used:   291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no342_k02.g1 MSMg01no342_k02.g1 CHROMAT_FILE:
MSMg01no342_k02.g1 PHD_FILE: MSMg01no342_k02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:12 2005
         (505 letters)



>mm_chr9_27936912_27937816
          Length = 905

 Score =  969 bits (501), Expect = 0.0
 Identities = 504/505 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   caattcgatagcaacagcactgcaggaagtattgatctggcaaaagctggaggccttcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 caattcgatagcaacagcactgcaggaagtattgatctggcaaaagctggaggccttcca 646

                                                                       
Query: 61  gcaagtttgagccatcctctcacaggtgcccatatgcaattgactttaccaacttcttgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gcaagtttgagccatcctctcacaggtgcccatatgcaattgactttaccaacttcttgc 586

                                                                       
Query: 121 ttcaatggagcaagcatgaactcagtaaaaacggctctccaattagcctttagtcagaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 ttcaatggagcaagcatgaactcagtaaaaacggctctccaattagcctttagtcagaga 526

                                                                       
Query: 181 gcaagtaagaggttggaagaagagacatgtaccagggcttagaaaaaaaggaaaagctag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gcaagtaagaggttggaagaagagacatgtaccagggcttagaaaaaaaggaaaagctag 466

                                                                       
Query: 241 atactaaatgtttttctctgggactctactactggactcttaggtctattttaaagacat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 atactaaatgtttttctctgggactctactactggactcttaggtctattttaaagacat 406

                                                                       
Query: 301 aattatcaacccagacaagctatttctaagggactcctgtatcatttaagatagccaaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 405 aattatcaacccagacaagctatttctaagggactcctgtatcatttaagatagccatat 346

                                                                       
Query: 361 ttgttacgcaataagaagatagatgagattaggatttttcagctttgttggagcaaacaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ttgttacgcaataagaagatagatgagattaggatttttcagctttgttggagcaaacaa 286

                                                                       
Query: 421 aatattacttggattttcttctgatatgaattcaaaagatttttatcctagataatgatt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 aatattacttggattttcttctgatatgaattcaaaagatttttatcctagataatgatt 226

                                    
Query: 481 tttatactgatagagatgatgagaa 505
           |||||||||||||||||||||||||
Sbjct: 225 tttatactgatagagatgatgagaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space:   443025
Effective search space used:   443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)