Query= MSMg01no342_m21.b1 MSMg01no342_m21.b1 CHROMAT_FILE:
MSMg01no342_m21.b1 PHD_FILE: MSMg01no342_m21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:25 2005
(414 letters)
>mm_chr9_32037511_32038324
Length = 814
Score = 683 bits (353), Expect = 0.0
Identities = 401/421 (95%), Gaps = 11/421 (2%)
Strand = Plus / Plus
Query: 1 atggcttccggcttcagttgttaaattctgactctcctctctggtctctttaccttaaaa 60
|||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 atggcttctggcttcagttcttaaattctgactctcctctctggtctctttaccttaaaa 257
Query: 61 ggatatggaaaatcatacaaggctctcaaaggagttttgaatttaactcctcactttcat 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 258 ggatatggaaaatcatacaaggctctcaaaggagttttgaatttaactccccactttcat 317
Query: 121 aattttaaaatt-aaaaaaagaga-a-aactaaaaatcatcttagtagataagtagatat 177
|||||||||||| ||||||||||| | ||||||||||||||||||||||||| |||||||
Sbjct: 318 aattttaaaatttaaaaaaagagagagaactaaaaatcatcttagtagataaatagatat 377
Query: 178 agcaaatcaccaggtaaagatgatcacacattaatttatacttcttaagaattagtagca 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 agcaaatcaccaggtaaagatgatcacacattaatttatacttcttaagaattagtagca 437
Query: 238 ggtaagttatt----ttttttggtgatttctgctcaaagtcccaaagtgattcttaatgg 293
||||||||||| || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 438 ggtaagttattcacatt----ggtgatttctgctcaaagtcccaaagtgactcttaatgg 493
Query: 294 tgagatgtaaaaaacaactaggttaaaaccagaagcaagataaccatgtaaaaatacttt 353
|||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 494 tgagatgtaagaaacaactaggttaaaaccagaagcaagataatcatgtaaaaacacttt 553
Query: 354 ttctatttttcttttcttagatttatttatgtcatgtatgtgggtacactgtcacagtct 413
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 554 ttctatttttcttttcttagatttatttatttcatgtatgtgggtacactgtcacagtct 613
Query: 414 t 414
|
Sbjct: 614 t 614
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no342_m21.g1 MSMg01no342_m21.g1 CHROMAT_FILE:
MSMg01no342_m21.g1 PHD_FILE: MSMg01no342_m21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:25 2005
(234 letters)
>mm_chr9_32192987_32193620
Length = 634
Score = 385 bits (199), Expect = e-111
Identities = 223/231 (96%), Gaps = 3/231 (1%)
Strand = Plus / Minus
Query: 1 catgtgggcgagagccccaaacactgtctgcaacaagaactatgc-tctgctttaaagaa 59
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 430 catgtgggcgagagccccaaacactgtctgcaacaagaactatgcat-tgctttaaagaa 372
Query: 60 aacatatagaactgcaagccttgacgtatctgagaaaggtaaccatccactaaggcctgg 119
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 371 aacatatagaactgcaagccttgacgtatctgagaagggtaaccatccactaaggcctgg 312
Query: 120 agaggatgaaaagggaaacccatatccatgtcctacatccatggacaatgactggctcag 179
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 311 agaggatgaagagggaaacccatatccatgtcctgcatccatggacaatgactggctcag 252
Query: 180 ctcaacttgatgcacacatgaagctggaggccttttgtgtt-ggggggggg 229
|||||||||||||||| |||||| ||||||||||||||||| |||||||||
Sbjct: 251 ctcaacttgatgcacatatgaagttggaggccttttgtgtttggggggggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
