Query= MSMg01no344_a14.b1 MSMg01no344_a14.b1 CHROMAT_FILE:
MSMg01no344_a14.b1 PHD_FILE: MSMg01no344_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:06 2005
(513 letters)
>mm_chr9_111965583_111966495
Length = 913
Score = 938 bits (485), Expect = 0.0
Identities = 491/493 (99%)
Strand = Plus / Minus
Query: 5 gaattcctctgttgtttatatttcctccctaaaaatgtgttaagggaatggcatcaggga 64
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 660 gaattcctctgttgtttatatttcctccctaaaaatgtgttaagggaatggcgtcaggga 601
Query: 65 aattctcatcggttttcatttgctcacactgcctactctggattttttgttttcagttgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 aattctcatcggttttcatttgctcacactgcctactctggattttttgttttcagttgt 541
Query: 125 ttagctgtggatagagttaatcacttaaaaaccctgcttagtagattatcatttctttct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ttagctgtggatagagttaatcacttaaaaaccctgcttagtagattatcatttctttct 481
Query: 185 gtcgggcgtcctcttcttcctttcaaggggggcttttgtgctattctaattatctctgct 244
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gtcaggcgtcctcttcttcctttcaaggggggcttttgtgctattctaattatctctgct 421
Query: 245 ccatgtgaagtctgctccattttcccatatctgggtctacttaatttttcatcatcataa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ccatgtgaagtctgctccattttcccatatctgggtctacttaatttttcatcatcataa 361
Query: 305 tccctgaccatgaaaagcattataagaatttttcttttaattgagccattgaaccaataa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tccctgaccatgaaaagcattataagaatttttcttttaattgagccattgaaccaataa 301
Query: 365 ccacactgaggaatgtcagcacacttacttccttagctaagatctttccctaatggaaag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ccacactgaggaatgtcagcacacttacttccttagctaagatctttccctaatggaaag 241
Query: 425 agggtcttggccaatatgtattcattctctaattacatttatttatttatttatttattt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 agggtcttggccaatatgtattcattctctaattacatttatttatttatttatttattt 181
Query: 485 atttatttattta 497
|||||||||||||
Sbjct: 180 atttatttattta 168
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no344_a14.g1 MSMg01no344_a14.g1 CHROMAT_FILE:
MSMg01no344_a14.g1 PHD_FILE: MSMg01no344_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:06 2005
(521 letters)
>mm_chr9_111896512_111897433
Length = 922
Score = 955 bits (494), Expect = 0.0
Identities = 515/522 (98%), Gaps = 1/522 (0%)
Strand = Plus / Plus
Query: 1 attacagccagttcttccctgtgtgtccacagagaaagtctgaatgatccacaaagcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attacagccagttcttccctgtgtgtccacagagaaagtctgaatgatccacaaagcctt 260
Query: 61 tgtagaggacactgatggctttttcgaattcagtgtcatgagaactaatcgtttttctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtagaggacactgatggctttttcgaattcagtgtcatgagaactaatcgtttttctac 320
Query: 121 tctggctgctcagagtaaccagggacattttgttcaacagcaacgtttggacagattttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctggctgctcagagtaaccagggacattttgttcaacagcaacgtttggacagattttc 380
Query: 181 agcatcctgtagacagaccaggaaa-ccccctttggttccctgtagagtcttattaaggc 239
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 381 agcatcctgtagacagaccaggaaacccccctttggttccctgtagagtcttattaaggc 440
Query: 240 agtcagttaactaaacaaacaaatgtttaatctataacttccaggataaatgaccaattt 299
|||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 441 agtcagttaactaaacaaacaaatgtttaatctataacttccagtataaattaccaattt 500
Query: 300 agcctgctacagagcataaaagaaaccagagacagacaaagagattcatttgtgtaactc 359
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 501 agcctgctacagagcataaaagaaataagagacagacaaagagattcatttgtgtaactc 560
Query: 360 catccactgtgggcaaattgatgaaatcgcatactcatacttagctcattaatgaagcca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catccactgtgggcaaattgatgaaatcgcatactcatacttagctcattaatgaagcca 620
Query: 420 ctgacctctgaagggcaaagacggcatcagcccaactaagcaaggagtcgaagctatgat 479
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 621 ctgacctctgaagggcaaagacggcatcagcccaactaagcaaggagtcgcagctatgac 680
Query: 480 gggctggaatgcagctggatgtcagagactttgctaatggca 521
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gggctggaatgcagctggatgtcagagactttgctaatggca 722
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 922
Length adjustment: 10
Effective length of query: 511
Effective length of database: 912
Effective search space: 466032
Effective search space used: 466032
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
