XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCACC
CCTTATCTATGCTAGAATATTGACTAGTATGATCTTGTATGGGCAACCAT
AGCTGTAGAAAGTTTATGAGTGCACCATCCCTGTCATAACCAGAGAGACT
TTCAAAGCAGTCTTCCCAGCCTTCAGGGTCTTGTAGTTTTCCACCCATTC
TGTGAGGATTTCTGAGCTTTGGATGTAAGGTGTTAGTATAGATATCCTAT
GTGGAAATGGGTATTCCATGAGCACTTTTGTGGAAATGGGTATTCCATGA
GCACTTTTGTTTGTTTGTTTGCTTGTTTTTTGAGACAGGGTTTCTCTGTA
TAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAAC
TCAGAAATCCGCCTGTCCCTGCCTCCCGAGTGCTGAGATTAAAGGCGTGC
GCCACCACGCCCGGCTCATCCGCACTTTCTCTCTTCACTTTGACTAGTTA
CGATTCTCTGTAATAACCTCTGTCTGCTACCAAAGGAATTTTTTTGATGA
GGATTGAGAGCAGTACTAAACCATGGGTATAAGAGTTTATAAAAGACTTG
CGCATTGTTGGGGCATCCCTGGGGGGGTGGTGGTGGTTCCATTCTAACTC
TTTTTTTTTTACTCTGCAAACGTTATTTTCATATATTTACTTTAAAAATT
GATTCTCTCTTTGTACCTTTCACAAATTACTCCCGCCCTTTTTTTTCACT
ATTTCTTTTCTN

AATGCTAGGCGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATTCTGTAGACCAGGTTGGCCTCAAA
CTCACAGAGATCCACCTGCCTCTGCCTCCCAAGTGCTAGAGTTAAAGGTG
TATACCACCACTTCTCAGCTAAATACATTTTTTTTGAGAGAACACAAGTC
AATATGTAGTAGTTCCCACTTTATACACGAGCAGACTAAGAGTTGGAGAG
ATGAAATGAATTGACTACAGATGGTTGTGAGCCACCATGTGGGGTGCTGG
GAATTGAACTCAGGACCTCCGGAAGAGCAGTCAGTGCTCTTAACCGCTGA
GCCACCTCTCCAGCCCCAGCTCATGCTTTTTTAATCTCAGAACTTGAGAG
ACAGAGACTGTGAGTTTAGAATAGTCTGGGTCCTGTGTACTCTCCAGCTC
CCGTTCTCTCTTCCTTTTTCTGGTTCGAGACCATCCAGAACTATATAGTA
AAACCCTGTTTAAGACAGAGACAGAGACTGAGAGACAGAGAGATTGGAGA
GTGATAGAGGAAACACCTGACATTGACAGCTGGCCTCCACATACTCGTGT
GCACACACAGACACCCAGACACATGCACACACTCCCATACTTGAATACAC
ACAAACACACCACACCACAATTTATAATTTTTAAAATAACCGTAANTGAT
ACCCAAACCGGACCCTTTTATTTTATTAATATATTTCCCCCGGAAACAAC
ACAAATTTCTAAAAAA

Query= MSMg01no344_d11.g1 MSMg01no344_d11.g1 CHROMAT_FILE:
MSMg01no344_d11.g1 PHD_FILE: MSMg01no344_d11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:20 2005
         (540 letters)



>mm_chr9_72630289_72631228
          Length = 940

 Score = 1015 bits (525), Expect = 0.0
 Identities = 537/541 (99%), Gaps = 1/541 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   attctgtagaccaggttggcctcaaactcacagagatccacctgcctctgcctcccaagt 60
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 932 attctgtagaccaggttggcctcaaactcacagaaatccacctgcctctgcctcccaagt 873

                                                                       
Query: 61  gctagagttaaaggtgtataccaccacttctcagctaaataca-ttttttttgagagaac 119
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 872 gctagagttaaaggtgtataccaccacttctcagctaaatacatttttttttgagagaac 813

                                                                       
Query: 120 acaagtcaatatgtagtagttcccactttatacacgagcagactaagagttggagagatg 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 acaagtcaatatgtagtagttcccactttatacacgagcagactaagagttggagagatg 753

                                                                       
Query: 180 aaatgaattgactacagatggttgtgagccaccatgtggggtgctgggaattgaactcag 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 aaatgaattgactacagatggttgtgagccaccatgtggggtgctgggaattgaactcag 693

                                                                       
Query: 240 gacctccggaagagcagtcagtgctcttaaccgctgagccacctctccagccccagctca 299
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 692 gacctccggaagagcagtcagtgctcttaaccgctgagccatctctccagccccagctca 633

                                                                       
Query: 300 tgcttttttaatctcagaacttgagagacagagactgtgagtttagaatagtctgggtcc 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tgcttttttaatctcagaacttgagagacagagactgtgagtttagaatagtctgggtcc 573

                                                                       
Query: 360 tgtgtactctccagctcccgttctctcttcctttttctggttcgagaccatccagaacta 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tgtgtactctccagctcccgttctctcttcctttttctggttcgagaccatccagaacta 513

                                                                       
Query: 420 tatagtaaaaccctgtttaagacagagacagagactgagagacagagagattggagagtg 479
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 512 tatagtaaaaccctgtttaagacagagacagagacagagagacagagagattggagagtg 453

                                                                       
Query: 480 atagaggaaacacctgacattgacagctggcctccacatactcgtgtgcacacacagaca 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 atagaggaaacacctgacattgacagctggcctccacatactcgtgtgcacacacagaca 393

            
Query: 540 c 540
           |
Sbjct: 392 c 392


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 940
Length adjustment: 10
Effective length of query: 530
Effective length of database: 930
Effective search space:   492900
Effective search space used:   492900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)