NTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAGTGTTTTGCTCCTGGTTTTGGTAGATGTTAAATTAAATGTTTAG
AAAATGTTAAACATTTAGAAGCACTGAAGCCAAGAAGTAGATCTATTTTT
AAAGCTGTTGTTGCATTTATAAATAAGTGAATTGGAGTGTCCTTAGGCAG
AGCATCCGTTCTTCATCTCCTGGCCCCTTGCTGTAGCTGTTTACATCATC
ACTTCAGGAGTTTTCTGGTTGTTGTTGTTTTTGGTTGTTGTTTGTTTTTT
ATAATACCTGCCTCATTGTCTTTTTCTGTAATTAGATTTCTTAGCTTGCT
TCTGGGGGCAGAAATATGTGTGCATGTACTGTGCAGTTGACTTAGCAAAA
TTTCTTTTGTAGTCAAAGAGAAACATATATAAAGATATATACTAATCAAC
TAAACATACATATGCAAACATGTATAATGATTGGGCAAGTGAACATGACA
CTTTATATGAGGCTGTCCTTTTCACTTACAAGTAAGCAGGTTATCTATTT
TTCCCTACTAAATACATTAAAATATTTTAAAACCCAGGGATTTAAAACTA
TAGAAATCTCCGCATTCCGGTTACGAATGCCGCCTAAGTAAGAGAAAGGA
TTTCGCAGTATTAATGACAGTAACACTCTCTTTATGTGAACGCAAGAAGA
CTTTGTTGAACATTGCTTTCATTATATCT

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCAGTGTATATTGAAGAGCAGGTGATATATC
CAGCCTCCTGGACTAAACAACTACTGGGTTCTTGAACCTTCCATGGAAAC
CGTTGTTGGATTAGCTGGATCATAGCCTGTAAATAAGTTAATATATTCCC
ATTCACAGATAGACAAACAGACAGACAGAGACAGAGACACAGAGCTACAC
AGAGAGACAAAGAGAGACACACAGAGACAGAAAGATTCTATAAATTTTAA
TACTCTAGAAAACCCTGACTAATATGGCCAGTAAATTGAGAAATGCTGTC
TTCTCAATTACTTAGATGCGAAGGAAAGATAATTAAACTTAGAGATTGAT
ATATTTACTGTATTTGAGGATCACAATGGGCACCAGAAGGGGAAAATGTG
AACAATTGAATAACACAGGGTCCGAGTGGGAGGGAAGGTAATGAAACCAG
CAGGAACATGATGGAAATTATAGTAGGCTTTATAGTGAAGACTCATCACA
TAAGAGAATGAGCCAGCGTGGGTGGATGAGCAGATCTGGTGGTGCTTAAA
AGGGATGGCGGGTTTTATCGTCCAATTAGGGCCTCACTGAGATGTATCTC
AGTTCACACACTGTGCTTGCACGGTTGTGGTGGAACCTCTCCATCAGGAG
TGGGAGTCTAAGCTTATTCCCCTN

Query= MSMg01no344_k03.b1 MSMg01no344_k03.b1 CHROMAT_FILE:
MSMg01no344_k03.b1 PHD_FILE: MSMg01no344_k03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:53 2005
         (485 letters)



>mm_chr9_76013599_76014483
          Length = 885

 Score =  857 bits (443), Expect = 0.0
 Identities = 470/479 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagtgttttgctcctggttttggtagatgttaaattaaatgtttagaaaatgtta 64
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagtgttttggtcctggttttggtagatgttaaattaaatgtttagaaaatgtta 264

                                                                       
Query: 65  aacatttagaagcactgaagccaagaagtagatctatttttaaagctgttgttgcattta 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aacatttagaagcactgaagccaagaagtagatctatttttaaagctgttgttgcattta 324

                                                                       
Query: 125 taaataagtgaattggagtgtccttaggcagagcatccgttcttcatctcctggcccctt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taaataagtgaattggagtgtccttaggcagagcatccgttcttcatctcctggcccctt 384

                                                                       
Query: 185 gctgtagctgtttacatcatcacttcaggagttttctggttgttgttgtttttggttgtt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gctgtagctgtttacatcatcacttcaggagttttctggttgttgttgtttttggttgtt 444

                                                                       
Query: 245 gtttgttttttataatacctgcctcattgtctttttctgtaattagatttcttagcttgc 304
           |||||||||||||||||||||||||||||||   | ||||||||||||||||||||||||
Sbjct: 445 gtttgttttttataatacctgcctcattgtcaagtcctgtaattagatttcttagcttgc 504

                                                                       
Query: 305 ttctgggggcagaaatatgtgtgcatgtactgtgcagttgacttagcaaaatttcttttg 364
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttctgggggcagcaatatgtgtgcatgtactgtgcagttgacttagcaaaatttcttttg 564

                                                                       
Query: 365 tagtcaaagagaaacatatataaagatatatactaatcaactaaacatacatatgcaaac 424
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 565 tagtcaaagagaaacatatataaagatatatactaatcaactaaacgtacatatgcatac 624

                                                                      
Query: 425 atgtataatgattgggcaagtgaacatgacactttatatgaggctgtccttttcactta 483
           ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 625 atgtataatgattgggcaagtgaacatgacactttatatgaggttgtccttttcactta 683


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space:   415625
Effective search space used:   415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no344_k03.g1 MSMg01no344_k03.g1 CHROMAT_FILE:
MSMg01no344_k03.g1 PHD_FILE: MSMg01no344_k03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:53 2005
         (450 letters)



>mm_chr9_76062282_76063131
          Length = 850

 Score =  758 bits (392), Expect = 0.0
 Identities = 395/396 (99%)
 Strand = Plus / Minus

                                                                       
Query: 55  tgggttcttgaaccttccatggaaaccgttgttggattagctggatcatagcctgtaaat 114
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 tgggttcttgaaccttccatggaaaccgttgttggattagctggatcatagcctgtaaat 791

                                                                       
Query: 115 aagttaatatattcccattcacagatagacaaacagacagacagagacagagacacagag 174
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 aagttaatatattcccattcacagatagacaaacagacagacagagacagagacacagag 731

                                                                       
Query: 175 ctacacagagagacaaagagagacacacagagacagaaagattctataaattttaatact 234
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 730 ctacacagagagacaaagagagacacacagagacagaaagattctataagttttaatact 671

                                                                       
Query: 235 ctagaaaaccctgactaatatggccagtaaattgagaaatgctgtcttctcaattactta 294
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 ctagaaaaccctgactaatatggccagtaaattgagaaatgctgtcttctcaattactta 611

                                                                       
Query: 295 gatgcgaaggaaagataattaaacttagagattgatatatttactgtatttgaggatcac 354
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gatgcgaaggaaagataattaaacttagagattgatatatttactgtatttgaggatcac 551

                                                                       
Query: 355 aatgggcaccagaaggggaaaatgtgaacaattgaataacacagggtccgagtgggaggg 414
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 aatgggcaccagaaggggaaaatgtgaacaattgaataacacagggtccgagtgggaggg 491

                                               
Query: 415 aaggtaatgaaaccagcaggaacatgatggaaatta 450
           ||||||||||||||||||||||||||||||||||||
Sbjct: 490 aaggtaatgaaaccagcaggaacatgatggaaatta 455


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space:   369600
Effective search space used:   369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)