NNCCATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTAGTCTTCACTTCCTTTGGTGATGAACAGCAATATGGAA
GTGTAAGCTGAATAAGCTTTCCTCCCCAACTTGCTTCTTGGTCATGATGT
TTTGTGCAGGAATAGAAACCCTGACTATAACATGGGTATAATTAGCAATG
GTATTATGAGACAAAGTATTGAAAGCCCCCAACATGTGCCATGCCCACAG
TAGACATGCAAAAATGTATCTTCACAGACTAACTTGATGCTATACATGTG
CTGACATTTACAAAATGTAACTGAGACAATTGAGTTAAGTTTGGCCTTCA
GGCCCCCCAGGAGACAGACTGAGTGGATGAAAAGAAAGAAGGTTAGGACA
CCATGATCTCGTACTCTGCCTGCTGTCCTCTTGTCCTTGATGGTTTTTGT
AGCATGCCATCAGCTCTCTACACATGGGAAGATCCTACCCTGTCTAAGCA
AGCTTCTGTCTTGCAACACTGATCAGGTAGGGTGGATGGATGCGTGGATG
CATGCATGCNCCTTTNNNNCTTTTCCCTTCCTTCTTACCTTTCTCTCCNC
CCTCCACCCCCCCNNCCTTCTTTCCCTTCTTTCCTCTTCTCCCNTNNCCC
TCTTTTCNNTTCNNCGTTTCTACTNTCTCGCGNACCTCCCCGTCTATTTT
CCTCTCCTTCCAGACGCCNCCCGCTCCTCCCCGNNACCCCCTTCTCCTCC
ACCNNCA

GCCCGAATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGCACTAAATCTGTCTACCCC
AGGACTATTATTGTGGTTGGGAGACTTTTAATAACTGCTTTTATCTCCTT
TGAGGTTATAGTTCTATTTAAAATGTTTGTCTGATCTTGATTTAATTTTG
GTTAAAAAAAACTTTATGTATCTATCAAGAAAATTATCTATTTCTTTTAA
ATTTTCCAATTTTGTAGAGTACAGGTTTTAAAATGAAGACTAATGATTCT
TTGGATTTCTTCAATGTCCGATATTATGTCCACTTTTTTGTTTCTGTTTT
TGTTAATTTGGATATTTTCTTCCTTCTATGTGGTTTGGATAAGGGTTTAT
CTATCTTGTTGATTTTCTCAAAGAACCAGCTCTTTATTTCATCAATTATT
ATACTGTTCTCTTTATTTCTGTTTTATTTATTTCAGCCCTCAGTTTATTT
CCTGCCATCTGCTCCTCCCTGGTGTGCTTTCTTCCTTTTGTTCTAGAGCT
TTTAGGTATCCTGTTAAGTCACTAGTATGAGATCTCTCCAGTTTCTTTAT
GAAAGAACGTTCTTGCTATAACCTTCCTCTCAGCAACACTTTCCCTTGGT
CCCATAACTTTGGGTATTTTGTATGCTTATTTTCATTGAACCCCTAAAAA
GCCTTTCATTTCTTTATTTCTGCTTTAAACCAAAGGACCCCTGTATAATA
G

Query= MSMg01no354_c04.b1 MSMg01no354_c04.b1 CHROMAT_FILE:
MSMg01no354_c04.b1 PHD_FILE: MSMg01no354_c04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:12 2005
         (495 letters)



>mm_chr9_120737107_120738000
          Length = 894

 Score =  882 bits (456), Expect = 0.0
 Identities = 480/488 (98%), Gaps = 3/488 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctagtcttcacttcctttggtgatgaacagcaatatggaagtgtaagctgaataa 64
           ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctagtcctgacttcctttggtgatgaacagcaatatggaagtgtaagctgaataa 264

                                                                       
Query: 65  gctttcctccccaacttgcttcttggtcatgatgttttgtgcaggaatagaaaccctgac 124
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gctttcctccccaatttgcttcttggtcatgatgttttgtgcaggaatagaaaccctgac 324

                                                                       
Query: 125 tataacatgggtataattagcaatggtattatgagacaaagtattgaaagcccccaacat 184
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatgacatgggtataattagcaatggtattatgagacaaagtattgaaagcccccaacat 384

                                                                       
Query: 185 gtgccatgcccacagtagacatgcaaaaatgtatcttcacagactaacttgatgctatac 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtgccatgcccacagtagacatgcaaaaatgtatcttcacagactaacttgatgctatac 444

                                                                       
Query: 245 atgtgctgacatttacaaaatgtaactgagacaattgagttaagtttggccttcaggccc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atgtgctgacatttacaaaatgtaactgagacaattgagttaagtttggccttcaggccc 504

                                                                       
Query: 305 cccaggagacagactgagtggatgaaaagaaagaaggttaggacaccatgatctcgtact 364
           || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 505 cc-aggagacagactgagtggatgaaaagaaagaaggttaggacaccatgatctcgcact 563

                                                                       
Query: 365 ctgcctgctgtcctcttgtccttgatggtttttgtagcatgccatcagctctctacacat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ctgcctgctgtcctcttgtccttgatggtttttgtagcatgccatcagctctctacacat 623

                                                                       
Query: 425 gggaagatcctaccctgtctaagcaagcttctgtcttgcaacactgatcaggta-gggtg 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 624 gggaagatcctaccctgtctaagcaagcttctgtcttgcaacactgatcagg-atgggtg 682

                   
Query: 484 gatggatg 491
           ||||||||
Sbjct: 683 gatggatg 690


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 894
Length adjustment: 10
Effective length of query: 485
Effective length of database: 884
Effective search space:   428740
Effective search space used:   428740
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)