NTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCATTTACCAACCTCCCCAGTTTAAGTTCCTTCCTTCCAATGAC
TCTGCATTTTTATGAGATGAAGTTTTGGTGGTAGGGTCTTACCAGCAGGA
CGTCTTTTTTATTCTTTCATCCAGAGCATGAAGTTTCTCTTTAATGGTGC
TAAACACTGTTACAATTATAGCTTATTTCAATCCTACCATGTCTGTAAGG
TCAAATTCAATCACATTCATTTCCTTTCCTAACTGTATAACCATAGCTTA
CTACTCCACAATTTCCTCTACATTTCTTATTAAAGAACTGGATGAGTGTA
ATATGAAGTTACCATGCTATAGCTTGAGTGCTTTCCTATCTTGAAATTTC
TTCCCAAGCAAATTAGTCTATTGCCTCATTCACGTTCTTGGGATATGGAC
AGAATGCAGCCACATTTTTTGCCAGATGTCTTACAAATATTACTAGTCCA
GTCTCTAGATAGCCTTGTTCTCTTTGAACATTTCTCCAACTGGTTCCTTA
ACATCTGCATTTCCTTCTGCATTCTGGCTTTACAAGTTTCTACCAGAATG
GTACATCACATTCTCCTTACAGCATGCTAAGACCTTTCTAGCTCAAAGTT
CAAATCTCTTCTGTGGTCCTTAAATGAAAAAATTCTAAAATTCTAAATGC
GCACCATCCGTTTTTCCACAGAAATGGGCCTCTTGCCCTGTTGAAAAATT
TTTTTTTGTAT

CCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTTATAGCTGAAGTTAGAGGCAATT
GTGAACCACCTCATGTTGGTGCTGGGAACTGAACTTTTGTTCTTTAGAAC
TTCTGTAGGAAATCTTAATTACTGAGCCACTTTTCCAATCCTTCCAATAA
CAACCTTCAGCAGTGGCTAAACATACTTAGAGTAGTATATATTACATTAA
ACAGGATTCTGGACTTATACACTTTTAGTTTGTAACCAACTTCTATCCAT
CTAGAGCCAGTGCCCTAATAACCAGGTTTAAATAAATGATCTCTAATTTA
AAATGAGATTCATATGCTGTAAAATATTTTAAAGGCTACTGTGAAGTGAA
TTCTGTCTATACTTATATGACTTAATGAGTAACTGAGTATGTTAACATGC
AATTGAAATTGTTTAAAAAATTCTAAAGGACAGCTTTTAGGCTACTAACT
TCCATCTAAAGTTTCATAATAGAGATCAAATACCTACTGTTTCAGCCAGG
AGATTCACTTTTCTCATCTGAGACAGCATGTTCACACCATGCGGAGGCTC
AGCATCTGGCTGGTATCACAGTCCTGTACACTGCTTACACTGCTTATATT
TACAAGCACATAAAATTGATTGTCCATCATGAAAAGAATATTTTGAGATC
ATTTTGCTAATTCTTCTATTTTCATTGGGCAGAGAGAAAATTCCCAAGAG
AACCCATTGTTTTCC

Query= MSMg01no354_e17.g1 MSMg01no354_e17.g1 CHROMAT_FILE:
MSMg01no354_e17.g1 PHD_FILE: MSMg01no354_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:24 2005
         (471 letters)



>mm_chr9_93337653_93338523
          Length = 871

 Score =  857 bits (443), Expect = 0.0
 Identities = 464/471 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttatagctgaagttagaggcaattgtgaaccacctcatgttggtgctgggaactgaact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 cttatagctgaagttagaggcaattgtgaaccacctcatgttggtgctgggaactgaact 728

                                                                       
Query: 61  tttgttctttagaacttctgtaggaaatcttaattactgagccacttttccaatccttcc 120
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 727 tttgttctttagaacttctgtaggaaatcttaatcactgagccacttttccaatccttcc 668

                                                                       
Query: 121 aataacaaccttcagcagtggctaaacatacttagagtagtatatattacattaaacagg 180
           |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 aatagcaaccttcaacagtggctaaacatacttagagtagtatatattacattaaacagg 608

                                                                       
Query: 181 attctggacttatacacttttagtttgtaaccaacttctatccatctagagccagtgccc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 607 attctggacttatacacttttagtttgtaaccaacttctatccatctagagccagtgacc 548

                                                                       
Query: 241 taataaccaggtttaaataaatgatctctaatttaaaatgagattcatatgctgtaaaat 300
           ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 547 taataaccaggtttaaataaatggtctctaatttaaaatgagattcatatgctgcaaaat 488

                                                                       
Query: 301 attttaaaggctactgtgaagtgaattctgtctatacttatatgacttaatgagtaactg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 487 attttaaaggctactgtgaagtgaattctgtctatacttatatgacttaatgagtaactt 428

                                                                       
Query: 361 agtatgttaacatgcaattgaaattgtttaaaaaattctaaaggacagcttttaggctac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 agtatgttaacatgcaattgaaattgtttaaaaaattctaaaggacagcttttaggctac 368

                                                              
Query: 421 taacttccatctaaagtttcataatagagatcaaatacctactgtttcagc 471
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 taacttccatctaaagtttcataatagagatcaaatacctactgtttcagc 317


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space:   396921
Effective search space used:   396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)