Query= MSMg01no358_c11.b1 MSMg01no358_c11.b1 CHROMAT_FILE:
MSMg01no358_c11.b1 PHD_FILE: MSMg01no358_c11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:21 2005
(501 letters)
>mm_chr9_23901917_23902815
Length = 899
Score = 911 bits (471), Expect = 0.0
Identities = 490/497 (98%), Gaps = 2/497 (0%)
Strand = Plus / Plus
Query: 5 gaattctatgtcagaaagtgataccagctgaaacaaacacataactctgacaaatttcag 64
|||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 205 gaattctatgtcagaaagtgataccagctgaaacaaacacataa--ctgacagatttcag 262
Query: 65 aagcacaaacatgacctgaattagtagaccagctaaatatcccaattgctccttagtgga 124
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 263 aagcacaaacatgacctgaattagtggaccagctaaatatcccaattgctccttagtgga 322
Query: 125 aactggagcagaaataaaggtctatcacacaagttaggaaagcacactggacaggcaagc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aactggagcagaaataaaggtctatcacacaagttaggaaagcacactggacaggcaagc 382
Query: 185 ccggacaggcaagcccatccaggaaacgtgagcacggtcttggggtgtccccttaggatg 244
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 383 ccggacaggcaagcccatccaggaaacgtgagcacggccttggggtgtccccttaggatg 442
Query: 245 cggccacactgggcaggtctgtgggatggtgagggctgtgctggctgcaggatcataact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cggccacactgggcaggtctgtgggatggtgagggctgtgctggctgcaggatcataact 502
Query: 305 gcagagaagagagcagcacgtggatcttccttgtcgtcaggcagaactcttcactgaggt 364
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gcagaggagagagcagcacgtggatcttccttgtcgtcaggcagaactcttcactgaggt 562
Query: 365 gggctcagggagggctctgtgcctgcgttctggtgagcaatagccagaagccttgagagg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gggctcagggagggctctgtgcctgcgttctggtgagcaatagccagaagccttgagagg 622
Query: 425 cagaagaggcactgagcaatcgatcaccagctgctgccccggctaactgaactctctcat 484
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 623 cagaagaggcactgagcaatcgatcagcagctgctgccccggctaactgaactctctcat 682
Query: 485 ccagctgcaggtgcaga 501
|||||||||||||||||
Sbjct: 683 ccagctgcaggtgcaga 699
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 899
Length adjustment: 10
Effective length of query: 491
Effective length of database: 889
Effective search space: 436499
Effective search space used: 436499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_c11.g1 MSMg01no358_c11.g1 CHROMAT_FILE:
MSMg01no358_c11.g1 PHD_FILE: MSMg01no358_c11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:21 2005
(497 letters)
>mm_chr9_24137027_24137923
Length = 897
Score = 932 bits (482), Expect = 0.0
Identities = 494/498 (99%), Gaps = 1/498 (0%)
Strand = Plus / Minus
Query: 1 atagctgagtaggcgtgatgatgacttt-cccctgtggtaccatccatagcaccacccag 59
|||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 851 atagctgagtaggcgtgatgatgagtttccccctgtggtaccatccatagcaccacccag 792
Query: 60 cattatgaaaaccagccaggagaaacgaagcttccaggtcagtaccagctttgtctcttt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 cattatgaaaaccagccaggagaaacgaagcttccaggtcagtaccagctttgtctcttt 732
Query: 120 atgttctgtgactcaagtatgagttgtcttcagcaatagggtcttaccagcaagttctgg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 atgttctgtgactcaagtatgagttgtcttcagcaatagggtcttaccagcaagttctgg 672
Query: 180 aaggtatctaagggaatggtaatatcctgtaatgttcagaagtctatggaacctcactaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 aaggtatctaagggaatggtaatatcctgtaatgttcagaagtctatggaacctcactaa 612
Query: 240 caacaaccctagtaccggcattgtctcacccttgcctttgctaccaggactacctgtact 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 caacaaccctagtaccggcattgtctcacccttgcctttgctaccaggactacctgtact 552
Query: 300 ttgcttcccaggtaaggtgcagtgtttatttttccaaatgttgctgccagtgagggacag 359
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 551 ttgcttcccaggtaaggtgcagtgtttatttttccaaatgatgctgccagtgagggacag 492
Query: 360 ggacagttctccagagtgtaggggcaggtgggaggtggggttgctcagtacagtgcctcg 419
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ggacagttctccagagtgtgggggcaggtgggaggtggggttgctcagtacagtgcctcg 432
Query: 420 agcagcattccagaccagaaacatctgcatggcctttgctggtaacatgggcatgggaca 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 agcagcattccagaccagaaacatctgcatggcctttgctggtaacatgggcatgggaca 372
Query: 480 tcaacacagactccagct 497
||||||||||||||||||
Sbjct: 371 tcaacacagactccagct 354
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space: 431969
Effective search space used: 431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
