Query= MSMg01no359_g12.b1 MSMg01no359_g12.b1 CHROMAT_FILE:
MSMg01no359_g12.b1 PHD_FILE: MSMg01no359_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:53 2005
(465 letters)
>mm_chr9_49045203_49046066
Length = 864
Score = 876 bits (453), Expect = 0.0
Identities = 459/461 (99%), Gaps = 1/461 (0%)
Strand = Plus / Minus
Query: 5 gaattcagcttgatctgattacagccatcttgactcataactgccatgatagtccttgag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 664 gaattcagcttgatctgattacagccatcttgactcataactgccatgatagtcc-tgag 606
Query: 65 taactctggccagttttccctactaagtttcctggcacaatacaaacaaacaccaaaaat 124
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 605 taactctggccagttttccctacttagtttcctggcacaatacaaacaaacaccaaaaat 546
Query: 125 gctattagaacacatatagagctttataactagaccctagcatgatcactaccaggaata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gctattagaacacatatagagctttataactagaccctagcatgatcactaccaggaata 486
Query: 185 tgtctgaaatcattgatagtagcttgaaatccattgatgaataattccagcttggaataa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tgtctgaaatcattgatagtagcttgaaatccattgatgaataattccagcttggaataa 426
Query: 245 gtcacttttgtcacaacaactatttaagcttcctccttgtgacccaaactgtgaggatcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gtcacttttgtcacaacaactatttaagcttcctccttgtgacccaaactgtgaggatcc 366
Query: 305 actgatcttgctgccaaccttgaccatactctgtcagtgagtctccataaaaccatctta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 actgatcttgctgccaaccttgaccatactctgtcagtgagtctccataaaaccatctta 306
Query: 365 tatagaatcctggttctgtctgtctcatggcaccttccacccacagaagtctacattagg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tatagaatcctggttctgtctgtctcatggcaccttccacccacagaagtctacattagg 246
Query: 425 ttttcttggaaaaaggaatcaaaaataatttcttctacaat 465
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ttttcttggaaaaaggaatcaaaaataatttcttctacaat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 864
Length adjustment: 10
Effective length of query: 455
Effective length of database: 854
Effective search space: 388570
Effective search space used: 388570
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_g12.g1 MSMg01no359_g12.g1 CHROMAT_FILE:
MSMg01no359_g12.g1 PHD_FILE: MSMg01no359_g12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:53 2005
(332 letters)
>mm_chr9_48874582_48875313
Length = 732
Score = 549 bits (284), Expect = e-161
Identities = 325/348 (93%), Gaps = 16/348 (4%)
Strand = Plus / Plus
Query: 1 agatttgcctcttgatgctgacctagaaattggaaaagtccctgggatcgtgttggctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agatttgcctcttgatgctgacctagaaattggaaaagtccctgggatcgtgttggctga 260
Query: 61 gatgcttggtgaggggatctgggaggacctttctgagtgcctcatcagaaactgcttggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatgcttggtgaggggatctgggaggacctttctgagtgcctcatcagaaactgcttggt 320
Query: 121 ttactctattcccacaaacagcagcaagctccaggaatatgaagaggtaaagggtggaga 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 ttactctattcccacaaacagcagcaagctccaggaatacgaagaggtaaagggtggaga 380
Query: 181 gagaatacgctttcagtcaggaaagttctatgctctgttggttg-ttt------------ 227
|||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 gagaatacgctttcagtcaggaaagttctatgctctgttggttggtttatttatttattt 440
Query: 228 ---tatttatcttttgttcttaagttatacccttaagaaaactgttactattaaaagtca 284
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atttatttatcttttgttctcaagttatacccttaagaaaactgttactattaaaagtca 500
Query: 285 ggcgggggtgtcacacacctttaattccagcatctgagaggcagaggt 332
|| || | |||||||||||||||||||||||| |||||||||| ||||
Sbjct: 501 ggtggtgctgtcacacacctttaattccagcacctgagaggcaaaggt 548
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
