Query= MSMg01no359_k09.b1 MSMg01no359_k09.b1 CHROMAT_FILE:
MSMg01no359_k09.b1 PHD_FILE: MSMg01no359_k09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:10 2005
(347 letters)
>mm_chr9_63767725_63768471
Length = 747
Score = 634 bits (328), Expect = 0.0
Identities = 337/340 (99%)
Strand = Plus / Minus
Query: 5 gaattccagatgctgtgctactgtgactgcctgtacctacctggttgctggggggtgggg 64
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gaattccagaggctgtgctactgtgactgcctgtacctacctggttgctggggggtgggg 485
Query: 65 gaggccagagggggtgtctccaggtcatgtgctccttccgagacaggcacagaaacaggg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gaggccagagggggtgtctccaggtcatgtgctccttccgagacaggcacagaaacaggg 425
Query: 125 atggggctatgtctgctcctgctggtctcaagtttagagatgtctggggtctgaccgtgc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 atggggctatgtctgctcctgctggtctcaagtttagagatgtctggggtctgaccgtgc 365
Query: 185 tctaccttgccagttccgtgtcaggtcctcttgtggcacagtccacgtgcctcgctgcca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tctaccttgccagttccgtgtcaggtcctcttgtggcacagtccacgtgcctcgctgcca 305
Query: 245 cgtctttcccaccacggtggactgcttcctcaaactctgagtcaaaaatgagcccttccc 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 cgtctttcccaccacggtggactgcttcctcaaactctgagtcaaaaatgagcccttcct 245
Query: 305 gtcttacattgccttcgctaggcagtagcaaggagtaagc 344
||||||||||||||||| ||||||||||||||||||||||
Sbjct: 244 gtcttacattgccttcgttaggcagtagcaaggagtaagc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 747
Length adjustment: 9
Effective length of query: 338
Effective length of database: 738
Effective search space: 249444
Effective search space used: 249444
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_k09.g1 MSMg01no359_k09.g1 CHROMAT_FILE:
MSMg01no359_k09.g1 PHD_FILE: MSMg01no359_k09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:10 2005
(416 letters)
>mm_chr9_63589716_63590531
Length = 816
Score = 775 bits (401), Expect = 0.0
Identities = 413/417 (99%), Gaps = 2/417 (0%)
Strand = Plus / Plus
Query: 1 tctctggtttgcccttctgtctccttaacgcccaactaaagcagacgatctgctcagggt 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 tctctggtttgcccttctgtctccttaacgtccaactaaagcagacgatctgctcagggt 260
Query: 61 gccatcagctgcctgctaggcactctgagcacagttacaaatatatttgcatctccctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccatcagctgcctgctaggcactctgagcacagttacaaatatatttgcatctccctct 320
Query: 121 tcacaacaagca-caggggatgggaccaagtacaggagtcctttcccgtgttgtccacac 179
||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 tcacaacaa-caacaggggatgggaccaagtacaggagtcctttcccatgttgtccacac 379
Query: 180 ctgcacgagcctggagcctcactccaagacactcggagtcaacagctattaattaagaag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctgcacgagcctggagcctcactccaagacactcggagtcaacagctattaattaagaag 439
Query: 240 taccttgtgccacaataagcaccctagtaggtccaggaagcctgctgacaacccactatc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taccttgtgccacaataagcaccctagtaggtccaggaagcctgctgacaacccactatc 499
Query: 300 tctgccattgacttcgtgtagcacgacaggctaatgacacatctggattctttccaggat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tctgccattgacttcgtgtagcacgacaggctaatgacacatctggattctttccaggat 559
Query: 360 agaggcccttggggagaggcccctgagggagaggcctctggggctgttcatgttttg 416
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agaggcccttggggagaggcccctgagggagaggcctctggggctgttcatgttttg 616
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
