ATGGGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCATTTCCCTTTACTCTTGACTATGGGTGTAACTGGTTGTTGCTT
CAAGTTCTTCCTCTGACTTCCCATAACAATGGGTTATAATCTGGAATTAT
AAGCCAAATAAACTCCCCCTAATTTTGGGGGGAGGTTAGAGAATTTTATC
ACAGCAGCATAAACAAAACTAGGATGCTGACCTACACGCTAAAGGCTGAG
GATCTCTACAATGGGTTGCTCCTCCTTACTAACCATGGAAGGGTCCTTTG
GAAACGAAGGCACTCTCTCTTATGCTAACAAATGGTACTATTGATCTTTG
ACTCTTCTTCTCATCTCTATTCATTAGCAATGGCCTAACTAGGTGCAGCT
CAACTATCCGATGTCCAGAGATGATTGATGAGGATGACAAGAACCTACGT
AGATGTTTCTTCTGAATGATGCCCTTGACAAACATCAGTAATTAGTATAC
ATACAACTGATTGGGAAGTGTACTCAGTGTTCTAGTACAAGTCTAATTCA
TCTTGGTCAAGTAGAGTTAGCCTCCTAGTGGAAGCCTAACAGAAGGGCAG
GGATAATGGGGTGAAGCCCTGCTCCTAAGGTTAGGTCATGGAGGCTGGCT
GCAGTTCCTCTATCTGGCTATGGGTTCCTGATCTGAGGTGGAGTATGAGG
AAGGTTAATGTTAAGTTTTN

CCATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXACTGGGACCTCCCTGGCGCCAGGCTG
CAGATATAATCTGTAGCTCAGGGCATGGGGGGGGGGGGGAGGTTCTNCAC
NTGNCCTCTNTTTTGGTTTGCTGGGTCCCGCCCCCCCCCCGCCCCCCGCC
CCCCCCCCCCCCCCGTCCCCCTCCCCCTTCCCCCCCTCCCTCTCCTCCCC
CCTCCCCCCTCTCCTCCCTCTCTCCCCCCCTTCCCTCCTCCTCCCCCCTT
CCCCCTTCCCCCTCCTCCTTTCCCCTTCCCCCTCCCCCCCCCCCCCTTCC
CGTCCTCTCTCCCCCCCTCGTGGCTTCTTCTTCTTTCCTCCCTTCCTCCC
CCTCTTCCCCTCCCCCCCTCCCCTCCCCTTCCCCCCCCCCCCCCCTCCCC
CCTCTTCCCCTCTTTTTCCCCCCCCCCTCCCCCCCCCCCTTCCCCTTCCC
CCCCCTTTCCCCCCCCCCTTCCCCCCCCCCCCCCCCCCCCTCCCCCCCCC
CCCTTCCTTTTCCCCCCCCCTCTCCCCCCCCCCTCCCCCCCCCCCCCCCC
CTCTTTCCCTTCCCCCCCCCCCCCTCCCCCCTCCCTTCCTGTTCCCCCTC
CCCCCCCCCCCTTCCCCTTTTCCCCCCTTCCCCCCCCCTCCTTCCCCCTT
TCCTCCCTCTTCCCCCTTTTCCCCCTTTCCCTCCCCCCTCTTCCCCCCCG
CTTCTCCCCCCCTCCCTCCCTCCCCATCTCCCN

Query= MSMg01no360_a02.b1 MSMg01no360_a02.b1 CHROMAT_FILE:
MSMg01no360_a02.b1 PHD_FILE: MSMg01no360_a02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:38 2005
         (584 letters)



>mm_chr9_60938248_60939231
          Length = 984

 Score = 1067 bits (552), Expect = 0.0
 Identities = 573/580 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcatttccctttactcttgactatgggtgtaactggttgttgcttcaagttcttcc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatttccctttactcttgactatgggtgtaactggttgttgcttcaagttcttcc 264

                                                                       
Query: 65  tctgacttcccataacaatgggttataatctggaattataagccaaataaactcccccta 124
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 265 tctgacttcccataacaatgggttataacctggaattataagccaaataaactcccccta 324

                                                                       
Query: 125 attttggggggaggttagagaattttatcacagcagcataaacaaaactaggatgctgac 184
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 325 attttggggggaggttagagtattttatcacagcagcataaacaaaactaggatgctgac 384

                                                                       
Query: 185 ctacacgctaaaggctgaggatctctacaatgggttgctcctccttactaaccatggaag 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctacacgctaaaggctgaggatctctacaatgggttgctcctccttactaaccatggaag 444

                                                                       
Query: 245 ggtcctttggaaacgaaggcactctctcttatgctaacaaatggtactattgatctttga 304
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 445 ggtcctttggaaacgaaggcactctctcttatgctaacaaatggtactattgatgtttga 504

                                                                       
Query: 305 ctcttcttctcatctctattcattagcaatggcctaactaggtgcagctcaactatccga 364
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttcttcttctcatctctattcattagcaatggcctaactaggtgcagctcaactatccga 564

                                                                       
Query: 365 tgtccagagatgattgatgaggatgacaagaacctacgtagatgtttcttctgaatgatg 424
           |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 565 tgtccagagatgattgatgaggatgacaagtacctatgtagatgtttcttctgaatgatg 624

                                                                       
Query: 425 cccttgacaaacatcagtaattagtatacatacaactgattgggaagtgtactcagtgtt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cccttgacaaacatcagtaattagtatacatacaactgattgggaagtgtactcagtgtt 684

                                                                       
Query: 485 ctagtacaagtctaattcatcttggtcaagtagagttagcctcctagtggaagcctaaca 544
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 685 ctagtacaagtctaattcatcttggtcaagtggagttagcctcctagtggaagcctaaca 744

                                                   
Query: 545 gaagggcagggataatggggtgaagccctgctcctaaggt 584
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gaagggcagggataatggggtgaagccctgctcctaaggt 784


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space:   559076
Effective search space used:   559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)