NAAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCAAACTCCACCATCCACTGAAAACAAATGATTAAGTCAAGCA
AACCTGGCAAGCTTTGTCTAATCAGGAAGCTCCAGGCTAGTGAGACATTC
TGCCTCAAATAAAAAAGGAGTAGTGGATCCTGAGGCACCTGGCATTGTCT
TATAGCTCATGTACACATGTGCGCGCGCACACACACACACACACACACAT
ACACAAACACACAAATACACAAACACCAACCAGGCTTGATCACTCTCCTG
TCTGTGTTAGTTTAGGTGACTCTCCCTCCTTGCTGAGACATCTTGGTAGC
AACCTGAGTGCTCACTTGGTAGGATCCTGAGAGTTTTATAATCATTCATC
TTTCTCCTAAGGCACTAAACACCCTAACACAGACAGGTAAATGGTCACTA
TGACTCTAGCCACAAGCCCAATACTGGAAGCATAGTGGGTATGCAGGTTC
TGTTGACTAATTGTATAAGAGAAGATAAAGGGATCGTTTGTATAAATGTT
TATCAAGTTAAAAATACATGCTTTAGATTCTACCATTAAGGGAAATTTGA
AAAATCAGACATATATATTTTCACTTTAGTTTAGGTAATAAAATTTATTT
CTCCATGTAAGTGGTTACTGTTGGCAGAATTTGTGTTGAACGCACCTCAA
TTTACCTTAAACTAAAGGCTTTTAATTTTAACTGGTCCAAAAACGCTGGT
TAATTGCAAAACCACAAA

NTTTCGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACTAAAATGGGGCATCTAAA
CACATTCCCAGCGTCATCTTGCTGACCCAGCACAGGAAGGAGTCTAGGAC
TTATAGATGTAGCATCTTTTAAAGAAATCCAAGCCATACCTACCTGAGAA
TCTGTAAGGTAAAGCACGCTTTTTCTTTTTCCTCTCCAAAAGATCCCTTC
TCTGTTCTTCTTGCAGAATGAGCCCTATAATTGCTTAATTCACCACTTCC
TTCTGACAGACACAGTTATATGTGTATATGCAGTGCACACATACATAAAC
ATGAGTCAGCTAACAACTGACAAGAAATTAAATATTTAAAGATGTTGCTG
GTCCTGTAGCTATCACAAGCATCTAGTTAGCATCTCATATTGGAAGGAAA
TCCCCTAACTAGCTCCTTTCTCCCTGCCCCCACTGCGCTCCTGATTATTT
ACATAAGGGCTTTAAGCACATAGTGTTATTTCTAGCTTTCACATCCAATG
TTGGGGAAAAGCGGACCTTGGTGAATTTTAAAATTTCAGGGTTAATAGGA
TAATTCTGGAATGGTAAGTATTTATTTAGCTTTTATGTAAGAAAATGCAT
GAATTTAATTCTCTTCTGACAGAAAAACAGTTTCTTTCCCCCCCTCCCCC
CAAAAGGGACATTTTAAAGGGCTTGAAGGGCCCCCTTTCCGCCTCATTTT
CTGGACAAAACATTACN

Query= MSMg01no361_f05.g1 MSMg01no361_f05.g1 CHROMAT_FILE:
MSMg01no361_f05.g1 PHD_FILE: MSMg01no361_f05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:20 2005
         (511 letters)



>mm_chr9_13388696_13389607
          Length = 912

 Score =  967 bits (500), Expect = 0.0
 Identities = 509/512 (99%), Gaps = 1/512 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   actaaaatggggcatctaaacacattcccagcgtcatcttgctgacccagcacaggaagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 actaaaatggggcatctaaacacattcccagcgtcatcttgctgacccagcacaggaagg 653

                                                                       
Query: 61  agtctaggacttatagat-gtagcatcttttaaagaaatccaagccatacctacctgaga 119
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 agtctaggacttatagatggtagcatcttttaaagaaatccaagccatacctacctgaga 593

                                                                       
Query: 120 atctgtaaggtaaagcacgctttttctttttcctctccaaaagatcccttctctgttctt 179
           |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 592 atctataaggtaaagcacgctttttctttttcctctccaaaagatccctcctctgttctt 533

                                                                       
Query: 180 cttgcagaatgagccctataattgcttaattcaccacttccttctgacagacacagttat 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 cttgcagaatgagccctataattgcttaattcaccacttccttctgacagacacagttat 473

                                                                       
Query: 240 atgtgtatatgcagtgcacacatacataaacatgagtcagctaacaactgacaagaaatt 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 atgtgtatatgcagtgcacacatacataaacatgagtcagctaacaactgacaagaaatt 413

                                                                       
Query: 300 aaatatttaaagatgttgctggtcctgtagctatcacaagcatctagttagcatctcata 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 aaatatttaaagatgttgctggtcctgtagctatcacaagcatctagttagcatctcata 353

                                                                       
Query: 360 ttggaaggaaatcccctaactagctcctttctccctgcccccactgcgctcctgattatt 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ttggaaggaaatcccctaactagctcctttctccctgcccccactgcgctcctgattatt 293

                                                                       
Query: 420 tacataagggctttaagcacatagtgttatttctagctttcacatccaatgttggggaaa 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 tacataagggctttaagcacatagtgttatttctagctttcacatccaatgttggggaaa 233

                                           
Query: 480 agcggaccttggtgaattttaaaatttcaggg 511
           ||||||||||||||||||||||||||||||||
Sbjct: 232 agcggaccttggtgaattttaaaatttcaggg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 912
Length adjustment: 10
Effective length of query: 501
Effective length of database: 902
Effective search space:   451902
Effective search space used:   451902
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)