Query= MSMg01no362_g17.b1 MSMg01no362_g17.b1 CHROMAT_FILE:
MSMg01no362_g17.b1 PHD_FILE: MSMg01no362_g17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:47 2005
(442 letters)
>mm_chr9_84044528_84045370
Length = 843
Score = 826 bits (427), Expect = 0.0
Identities = 433/435 (99%), Gaps = 1/435 (0%)
Strand = Plus / Plus
Query: 9 tctcaattgaggaatagcgaatagctgagaagcacctgaaaatatgttcaacatccttaa 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 tctcaattgaggaatagcgaatagctgagaagcacctgaaaatatgttcaacatccttaa 268
Query: 69 tcatcagggaaatgcaaatcaaaacaagcctgagatttcacctcaaaccagtcagaatgg 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tcatcagggaaatgcaaatcaaaacaagcctgagatttcacctcaaaccagtcagaatgg 328
Query: 129 catcaaaaattcagatgacagcagatgctggcgaggatgtggagaaagaggaacactcct 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 catcaaaaattcagatgacagcagatgctggcgaggatgtggagaaagaggaacactcct 388
Query: 189 ccattgttggtgggcttaagttttttttt-aatggtaataatagtaattatgtaattcaa 247
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 389 ccattgttggtgggcttaagttttttttttaatggtaataatagtaattatgtaattcaa 448
Query: 248 aagtgttctctttaatagccctatttcaaatactattaactattcagcgacatcacatta 307
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 449 aagtgttctctttaatagccctatttcaaatactattaactattcagcaacatcacatta 508
Query: 308 gacaacatcaaagccaaacatgtagaatactggttgatcaaaaattaccttgcttttttt 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 gacaacatcaaagccaaacatgtagaatactggttgatcaaaaattaccttgcttttttt 568
Query: 368 ttttttgatgcagtcgacatagtgagtttaaagcagaagtaaagcgagcaattcctacct 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ttttttgatgcagtcgacatagtgagtttaaagcagaagtaaagcgagcaattcctacct 628
Query: 428 tcaaaagcaaatcaa 442
|||||||||||||||
Sbjct: 629 tcaaaagcaaatcaa 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 843
Length adjustment: 9
Effective length of query: 433
Effective length of database: 834
Effective search space: 361122
Effective search space used: 361122
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_g17.g1 MSMg01no362_g17.g1 CHROMAT_FILE:
MSMg01no362_g17.g1 PHD_FILE: MSMg01no362_g17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:47 2005
(476 letters)
>mm_chr9_84175555_84176430
Length = 876
Score = 623 bits (322), Expect = 0.0
Identities = 325/326 (99%)
Strand = Plus / Minus
Query: 151 cattcacggctacgtgtgtcaggatagctgccccactggcttccagggaccactgccctc 210
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 876 cattcacggctacgtgtgtcaggatagctgccccactggcttccagggaccgctgccctc 817
Query: 211 actttccatctgatgttgggaacactgcattataggtgcacaaaaccacaccttgttgtg 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 actttccatctgatgttgggaacactgcattataggtgcacaaaaccacaccttgttgtg 757
Query: 271 catgggttctgggcattcaaactcaggtcctcacacttgtatggcaaggatttaagccac 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 catgggttctgggcattcaaactcaggtcctcacacttgtatggcaaggatttaagccac 697
Query: 331 caagccacctctccaatccccttataaagatctttgaaacaaaatctgaacaaaggcaat 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 caagccacctctccaatccccttataaagatctttgaaacaaaatctgaacaaaggcaat 637
Query: 391 caggccattaatggggaggggagaattgtaaatttcagtgtaatggaaagttgcccaagt 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 caggccattaatggggaggggagaattgtaaatttcagtgtaatggaaagttgcccaagt 577
Query: 451 aaatataattaattagtgacagaact 476
||||||||||||||||||||||||||
Sbjct: 576 aaatataattaattagtgacagaact 551
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
