CCCCCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCATTCTTTGCGGCCTTGTACAAGATACCACTACCTGAAGC
TGCCCAGAGAATGCTTTGTCCTCTATCAACTGGTGGAGAAAATTTGCTTT
TCTCTCTCTTTCTTGGTCCTCTAGGAAAGTCAATCCTTAACTGTCTTCCC
CATTCTCCATGAAAAAGATATCTTTCCTACCTTAATAAAAACAGCCAAAT
TAACTACTTCTGGGAGAAAGTTCTAATTAGACAGGCATCATAAAATAATG
TAATCAATAACTTTTCCCTAGCTTCATAAAACTCGTGGCATCCATGTCTT
CCACAAATCAATGACAACACTGTCACTCATCAGCACCTTAGACTCTGATA
CCCTGCCAGCCCTCCATCTGATAGGCCCCTCCAATATTATCTACATAGTC
CTGGATCTACAACCTAGGGGAAATGGTCTTTGTCAGTGAGAGGTGAGAGA
CTCCATCTTCTTTGATCTCTTAGTTTTAGTTGCCCCAACAGCTCTTCCTC
TAAGAAGTTGCCTTTTTAAGCAGCCAACAATGAGCCCTTGTTCATGGATG
GAGGAGATGACAAGGCAGGAGAGATGACTGTTACCAAGTCTAACAACCTG
AGTTAGATCCCATGGTGAAAGGAGAGAACTGAGTCCTGAGATCTATCTTT
TGACTAATACACTTGCACTGTGGGT

NTTTTCGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTACTGGAACATGGCACCTT
TTATACTAATATGTAGCCAATGATACTGAGGCTACAGCAGGAACAAGGTA
GAAGAAGAAGAAGAATAGGAAAAGGATGAGGAGGAATAGAAAGAAGAGGA
AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAG
AAGAAGAAGAAGAAGAAGAAGATGAAGAATAAGAAGATGAAGTGGATTTT
TATGATTATTCATTTTCCCCTGTTTCTTTTGTGCCCTCCTCTCTGTTCTC
CCGTGTTCTCTCCTTCTTCTTTCTTTTTCTCCTCTTTTTTTGGCGTCGTT
CTTCTCTTTTCTCCTTCTCTTTTCCCCCCCCTTTTCTACCTCTTCCTTTT
CTTTTTCTCTCTTCCTGTGTGTATCTCTTCTCCTCCTTTTCCCCTTCCTT
TCTTTCTCTCTTCTTCCTCCCCCCCCTCCCTTTCCCCCTTTTCCTTTTTC
CCCCCCTCTTTTTTTTTTCCCCCTCCCCCTTTCTCCCCCCCTCTCCCTCC
TTTCCCTCCTCTCTCCCTTTTTTTCTTTCTCCCTTTTCCTCCGTCCCCCT
TTTTCTCTTCTTTTATCCTCCCCTCCATTGGGTCGTCTTTTTCTCTCTTA
TCCCCTTTCTTTTCCTCCTGTTTCTTTTATTTATTCTTCCCCCCCCGTTC
TTCCCTCGTTCTTTTTTTCTCTTCCTCCCCTCCTCCCG

Query= MSMg01no362_i19.b1 MSMg01no362_i19.b1 CHROMAT_FILE:
MSMg01no362_i19.b1 PHD_FILE: MSMg01no362_i19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:58 2005
         (545 letters)



>mm_chr9_28415922_28416866
          Length = 945

 Score = 1046 bits (541), Expect = 0.0
 Identities = 544/545 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   gccttgtacaagataccactacctgaagctgcccagagaatgctttgtcctctatcaact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gccttgtacaagataccactacctgaagctgcccagagaatgctttgtcctctatcaact 686

                                                                       
Query: 61  ggtggagaaaatttgcttttctctctctttcttggtcctctaggaaagtcaatccttaac 120
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 685 ggtggagaaaatttgcttttctctctcttttttggtcctctaggaaagtcaatccttaac 626

                                                                       
Query: 121 tgtcttccccattctccatgaaaaagatatctttcctaccttaataaaaacagccaaatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgtcttccccattctccatgaaaaagatatctttcctaccttaataaaaacagccaaatt 566

                                                                       
Query: 181 aactacttctgggagaaagttctaattagacaggcatcataaaataatgtaatcaataac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aactacttctgggagaaagttctaattagacaggcatcataaaataatgtaatcaataac 506

                                                                       
Query: 241 ttttccctagcttcataaaactcgtggcatccatgtcttccacaaatcaatgacaacact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttttccctagcttcataaaactcgtggcatccatgtcttccacaaatcaatgacaacact 446

                                                                       
Query: 301 gtcactcatcagcaccttagactctgataccctgccagccctccatctgataggcccctc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtcactcatcagcaccttagactctgataccctgccagccctccatctgataggcccctc 386

                                                                       
Query: 361 caatattatctacatagtcctggatctacaacctaggggaaatggtctttgtcagtgaga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caatattatctacatagtcctggatctacaacctaggggaaatggtctttgtcagtgaga 326

                                                                       
Query: 421 ggtgagagactccatcttctttgatctcttagttttagttgccccaacagctcttcctct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggtgagagactccatcttctttgatctcttagttttagttgccccaacagctcttcctct 266

                                                                       
Query: 481 aagaagttgcctttttaagcagccaacaatgagcccttgttcatggatggaggagatgac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagaagttgcctttttaagcagccaacaatgagcccttgttcatggatggaggagatgac 206

                
Query: 541 aaggc 545
           |||||
Sbjct: 205 aaggc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space:   500225
Effective search space used:   500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)