NNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCATAAAAACCTTCGCTCATAGGCCATACCTTCAGCTTTTGT
GAATAAAGTTTCATTGAAACACTGTCAGAAAAGAAGAAGATAATCAACAG
ATGAGGAGATTTCTAAGAGGGTCAATGCAATACTGGATAATCCTGAGGAA
CTGAGTTCGGATCCCTAGCACCCACATCAAAGAGGACACAGCCATGCCTG
CAAATAACCCAGTGCTGGAGGGAGTTGGGGCAAGATGTAAAGACAGAGAA
GAATCACTGGGGATTACTTGCTACAAGTCTAGGAGAAAACTAGGAAGTTC
CAGGTTAAAGGTGAGATGGTGTCTCAAGGGAGTAAGATAGAAAACGTTAG
AGTAGGAAACAAGCATCTTTCTCTTCCAGCTTTGGCACACACATGCATGT
GCACTCAAAAATACCTGCACACACATACATAACACAAATAGATAGAAATA
CAGACATACAGACAGACAGTAGATATATAGATAGATAGATAGATATATAG
ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGGATTGNT
NGACNCNTNNNTTTTTGTGTTCCCGTACNCTAAGAGTGCGATCTTTCTGT
TATTTTTGTACCTTCTTTGTTCGCCTTACCTCTAAGTTGCTACCATTTTT
ATTTCCCCTCATCTTCGTTTCCCCTTATTGGTCATCTTACCACCTCCCGC
G

NNNCCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAATTAGTGAGGGAGATATAC
ACAAAAAGATAACTAATAACACAATCTTTCTAATAACAGAGAGCAGGAGA
CAAATTAGTGATAAGATAATCAAGATCATTGTAGTTCCAAGGAAAAGGCA
ATTAAATTTAGCTGGAAGTGGGGTATAAGCTGCCTTCCAAATCTTAGATC
TACTTTTAATAGGCAAATAAAAGAAAAGAGAGGACCATCTGGTTTTCTAC
TCCATCATGCCATTGAAACTATACTCTGAAACATTTCCAATAACCTCTAA
TTGCTGTCTCTAATAGGCTTTCCTCTGCCTTCCGTTCCTACTCGCTTTGC
AGATTTTGACTTAAAAAACTTCCTCTCATTCTGGTTTCTGTAAGAGTTTT
CTGAGTGCCTGTGTTATTTCTTTGGTTGGATTTTCCTCCTCCTGTGGCAT
GAACCTGGGAGATTTAGTGCAGCAGGTTGCGTGTCTGCCCTTACCCTGAC
CTTTCTTGCCTCCCATTGCTTGGGTTTAGTTTTCACGTAAAGCTAGAGCA
ACCAAGGACACTGACCTGTAGTTTGCTGTGGGCAGTGGGAGGATCAACCT
CCTTTGCTGGAAAAGATGGAGGAAGTCAGCAGTCTTCAGCCTTAAGCACT
GCCGGGAATGTTGCAGGGTGAACTTTCATGGGTCTTCACCATC

Query= MSMg01no366_j01.g1 MSMg01no366_j01.g1 CHROMAT_FILE:
MSMg01no366_j01.g1 PHD_FILE: MSMg01no366_j01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:27 2005
         (551 letters)



>mm_chr9_28340657_28341607
          Length = 951

 Score = 1027 bits (531), Expect = 0.0
 Identities = 546/551 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   caattagtgagggagatatacacaaaaagataactaataacacaatctttctaataacag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caattagtgagggagatatacacaaaaagataactaataacacaatctttctaataacag 260

                                                                       
Query: 61  agagcaggagacaaattagtgataagataatcaagatcattgtagttccaaggaaaaggc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagcaggagacaaattagtgataagataatcaagatcattgtagttccaaggaaaaggc 320

                                                                       
Query: 121 aattaaatttagctggaagtggggtataagctgccttccaaatcttagatctacttttaa 180
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattaaatttagctggaagtgggatataagctgccttccaaatcttagatctacttttaa 380

                                                                       
Query: 181 taggcaaataaaagaaaagagaggaccatctggttttctactccatcatgccattgaaac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taggcaaataaaagaaaagagaggaccatctggttttctactccatcatgccattgaaac 440

                                                                       
Query: 241 tatactctgaaacatttccaataacctctaattgctgtctctaataggctttcctctgcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatactctgaaacatttccaataacctctaattgctgtctctaataggctttcctctgcc 500

                                                                       
Query: 301 ttccgttcctactcgctttgcagattttgacttaaaaaacttcctctcattctggtttct 360
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttccgttcctactctctttgcagattttgacttaaaaaacttcctctcattctggtttct 560

                                                                       
Query: 361 gtaagagttttctgagtgcctgtgttatttctttggttggattttcctcctcctgtggca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtaagagttttctgagtgcctgtgttatttctttggttggattttcctcctcctgtggca 620

                                                                       
Query: 421 tgaacctgggagatttagtgcagcaggttgcgtgtctgcccttaccctgacctttcttgc 480
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 621 tgaacctgggagatttagtgcagcaggttgtgtgtctgcccttaccctgacctttcttgc 680

                                                                       
Query: 481 ctcccattgcttgggtttagttttcacgtaaagctagagcaaccaaggacactgacctgt 540
           |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 681 ctcccattgcttgggtttagttttcacgtagagctagagcaaccgaggacactgacctgt 740

                      
Query: 541 agtttgctgtg 551
           |||||||||||
Sbjct: 741 agtttgctgtg 751


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space:   509081
Effective search space used:   509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)