Query= MSMg01no372_c17.b1 MSMg01no372_c17.b1 CHROMAT_FILE:
MSMg01no372_c17.b1 PHD_FILE: MSMg01no372_c17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:51 2005
(532 letters)
>mm_chr9_52444340_52445271
Length = 932
Score = 658 bits (340), Expect = 0.0
Identities = 358/364 (98%)
Strand = Plus / Minus
Query: 1 actagggtgacaggtgtggttgatcacccttagcttatttcaaaaaataattttttattc 60
|||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 364 actagggtgacaggtgtgattgatcacccttatcttatttcaaaaaataattttttattc 305
Query: 61 gttgaaagcatcttaggtgtataccatgaatttgatcgtatcctcctctcattcaccttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gttgaaagcatcttaggtgtataccatgaatttgatcgtatcctcctctcattcaccttt 245
Query: 121 ctgactcttctagagaccccaattatgaccctcaaactagtgtattttttaagccaccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 244 ctgactcttctagagaccccaattatgaccctcaaactagtgtattttttaagccactaa 185
Query: 181 gttcaattagtagtaaccatttatatatgtattttgtgtcatctactagagaatgaacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gttcaattagtagtaaccatttatatatgtattttgtgtcatctactagagaatgaacaa 125
Query: 241 cgcatcagggaccacatttagaagaaaaatggtctcccccagtagccatcaactatcaat 300
|||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 124 cgcatcagggaccacacttagaagaaaaatggcctccctcagtagccatcaactatcaat 65
Query: 301 ggctcctcagttaggggtggagcctactgtgaccctcccccatcctcattggaacgttgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ggctcctcagttaggggtggagcctactgtgaccctcccccatcctcattggaacgttgg 5
Query: 361 ctgg 364
||||
Sbjct: 4 ctgg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 932
Length adjustment: 10
Effective length of query: 522
Effective length of database: 922
Effective search space: 481284
Effective search space used: 481284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_c17.g1 MSMg01no372_c17.g1 CHROMAT_FILE:
MSMg01no372_c17.g1 PHD_FILE: MSMg01no372_c17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:51 2005
(423 letters)
>mm_chr9_52303329_52304151
Length = 823
Score = 756 bits (391), Expect = 0.0
Identities = 412/421 (97%), Gaps = 4/421 (0%)
Strand = Plus / Plus
Query: 4 ggcttgtcatgttttaataagagctcatcgggtccagctttgttagaaagtcaggctgtt 63
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 200 ggcttgtcatgttttaataagagctcatcgggtccagctttgttggaaagtcaggctgtt 259
Query: 64 gaatgttcctgggagcttggtggtgctgagggaggaacctgctagctcagcaggtagctc 123
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 260 gaatgttcctgggagcttggtggtgttgagggaggaacctgctagcccagcaggtagctc 319
Query: 124 aggtgatgtgcaaagatgggcgaacacagctcctccttctcaggggcatcagagagaaag 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aggtgatgtgcaaagatgggcgaacacagctcctccttctcaggggcatcagagagaaaa 379
Query: 184 cagtggagaaaggctgaggtagtagattgacagctctgagtcctcagctggtaatttaga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cagtggagaaaggctgaggtagtagattgacagctctgagtcctcagctggtaatttaga 439
Query: 244 gtaagagagagggggcgctaaagagcaagagagcatgagagctggagagagcgagagcaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtaagagagagggggcgctaaagagcaagagagcatgagagctggagagagcgagagcaa 499
Query: 304 gagggagagagaaagaa----gtatttcttggcatctaaatatcaggtcttattctattt 359
||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 500 gagggagagagaaagaacgaagtattttttggcatctaaatatcaggtcttattctattt 559
Query: 360 ggtggggaataaatcaggaaaaggccatcacaaaagtatttttaaatacccaagaagaca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggtggggaataaatcaggaaaaggccatcacaaaagtatttttaaatacccaagaagaca 619
Query: 420 c 420
|
Sbjct: 620 c 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
