Query= MSMg01no374_a17.b1 MSMg01no374_a17.b1 CHROMAT_FILE:
MSMg01no374_a17.b1 PHD_FILE: MSMg01no374_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:08 2005
(574 letters)
>mm_chr9_22989409_22990383
Length = 975
Score = 1029 bits (532), Expect = 0.0
Identities = 557/566 (98%), Gaps = 5/566 (0%)
Strand = Plus / Minus
Query: 13 gaattcagtgaccacagaaatctacttcctaagcaaagttttctgtgataagtcaggcat 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 gaattcagtgaccacagaaatctacttcctaagcaaagttttctgtgataagtcaggcat 750
Query: 73 ggtgcatatacctgcaaccccaaaactaaggtgactaaagcaggtagaaagaccaatatg 132
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 749 ggtgcatatacctgcaacccctaaactaaggtgactaaagcaggtagaaagaccaatatg 690
Query: 133 gtctatatagcaagaccttgtct--aaaaaacaaacaaacaaac-aaaaatgctgttttt 189
||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 689 gtctatatagcaagaccttgtctaaaaaaaacaaacaaacaaacaaaaaatgctgttttt 630
Query: 190 gttataatgcaaatataaatcctatatattattaaaaatgtagacaaagttggggagagt 249
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 629 gttataatgcaaatataaatcctatatgttattaaaaatgtagacaaagttggggagagt 570
Query: 250 ttctttgcataaacatgtgacacatgg-agaaggatacactgaaatacaaaggtctgtct 308
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 569 ttctttgcataaacatgtgacacatggca-aaggatacactgaaatacaaaggtctgtct 511
Query: 309 tgctctaggtctgtatcccaaaatgaaaagccaaatggaagcaggaacagaaaacagatg 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tgctctaggtctgtatcccaaaatgaaaagccaaatggaagcaggaacagaaaacagatg 451
Query: 369 ccagaagtcagcccagagcagatcaagcctggacaggatttggaatgatgtggagtaggg 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ccagaagtcagcccagagcagatcaagcctggacaggatttggaatgatgtggagtaggg 391
Query: 429 aggggaggatgactgaaagcaccgcaggaccagaatccagttcccagcaccatcatccat 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 aggggaggatgactgaaagcaccgcaggaccagaatccagttcccagcaccatcatccat 331
Query: 489 ctgttaacaacctcctataacttcagttccaagggatcatctggtctcagaaggcatcgc 548
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 330 ctgttaacaacctcctataacttcaattccaagggatcatctggtctcagaaggcatcgc 271
Query: 549 gcgcgcactcatacatacatacatac 574
|||||||| |||||||||||||||||
Sbjct: 270 gcgcgcacacatacatacatacatac 245
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 975
Length adjustment: 10
Effective length of query: 564
Effective length of database: 965
Effective search space: 544260
Effective search space used: 544260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no374_a17.g1 MSMg01no374_a17.g1 CHROMAT_FILE:
MSMg01no374_a17.g1 PHD_FILE: MSMg01no374_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:09 2005
(331 letters)
>mm_chr9_22807984_22808714
Length = 731
Score = 598 bits (309), Expect = e-175
Identities = 324/329 (98%)
Strand = Plus / Plus
Query: 1 tttggtcacacaggattcaacaattgaccaagatcaaagctaagtcagctgtgtggcggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttggtcacacaggattcaacaattgaccaagatcaaagctaagtcagctgtgtggcggg 260
Query: 61 cccagcaccgtatatttcacgtaaatggtgtggcttgtggcacactcagtcggagttggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccagcaccgtatatttcacgtaaatggtgtggcttgtggcacactcagtcggagttggt 320
Query: 121 cccattttacatccctcctgcagagagtgggacccagcacaggagctgttctgtgactga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccattttacatccctcctgcagagagtgggacccagcacaggagctgttctgtgactga 380
Query: 181 ccccgttttcctcaggagctggtacaagtctgtccgaacctgaagtcattctaacattcc 240
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct: 381 ccccgttttcctcaggagctggtacaggtctgtccgaacatgaagtcattctaacattcc 440
Query: 241 tgtcagttgtatctgaaattccacgaaggatggggtcattctaggccctacgaggtctgg 300
||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 tgtcagtcgtatctgaaatttcacgaaggatggggtcattctaggccctaggaggtctgg 500
Query: 301 ggttgtaggggggcagtggtggggaatgg 329
|||||||||||||||||||||||||||||
Sbjct: 501 ggttgtaggggggcagtggtggggaatgg 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 731
Length adjustment: 9
Effective length of query: 322
Effective length of database: 722
Effective search space: 232484
Effective search space used: 232484
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
