Query= MSMg01no375_c23.b1 MSMg01no375_c23.b1 CHROMAT_FILE:
MSMg01no375_c23.b1 PHD_FILE: MSMg01no375_c23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:41 2005
(447 letters)
>mm_chr9_67977245_67978091
Length = 847
Score = 698 bits (361), Expect = 0.0
Identities = 361/361 (100%)
Strand = Plus / Minus
Query: 87 ggaggctttgaggtttcaaagcctcacatcaccccctctccttgcttacagttcaatgag 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 ggaggctttgaggtttcaaagcctcacatcaccccctctccttgcttacagttcaatgag 788
Query: 147 tgagcactcggcttcatgctccagtgccctgcttgctgcctgctgccatgcctccctgcc 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 tgagcactcggcttcatgctccagtgccctgcttgctgcctgctgccatgcctccctgcc 728
Query: 207 atgacagactctgattcctttgtaattgtaaaccaaataaacccttccttctatatgttg 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 atgacagactctgattcctttgtaattgtaaaccaaataaacccttccttctatatgttg 668
Query: 267 ccttggtcttggtgttttatggccacaatggcacgctagcatgtgtaaggtgggtctgaa 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 ccttggtcttggtgttttatggccacaatggcacgctagcatgtgtaaggtgggtctgaa 608
Query: 327 atacctgcttccatctttgaggttctgtatctgtagacccattcaccattctccaccttg 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 atacctgcttccatctttgaggttctgtatctgtagacccattcaccattctccaccttg 548
Query: 387 ccatcagtgaataccccagcacagcagtgagtaagtacctcagcccagcagtaagtaccc 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ccatcagtgaataccccagcacagcagtgagtaagtacctcagcccagcagtaagtaccc 488
Query: 447 t 447
|
Sbjct: 487 t 487
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no375_c23.g1 MSMg01no375_c23.g1 CHROMAT_FILE:
MSMg01no375_c23.g1 PHD_FILE: MSMg01no375_c23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:42 2005
(436 letters)
>mm_chr9_67834112_67834952
Length = 841
Score = 830 bits (429), Expect = 0.0
Identities = 436/441 (98%), Gaps = 5/441 (1%)
Strand = Plus / Plus
Query: 1 acagggtggactgtgaaaccagtgcccatctcccctccgcgatgcactctgaagatgccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagggtggactgtgaaaccagtgcccatctcccctccgcgatgcactctgaagatgccg 260
Query: 61 cttcagctctgggaatt-----cctcgtttatggcttttgcaatccttgtttgtggcttg 115
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttcagctctgggaattgtcttcctcgtttatggcttttgcaatccttgtttgtggcttg 320
Query: 116 tttttgtaattagcaaggaatggctagggactgacatatttttaagatgtgggttccatt 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttttgtaattagcaaggaatggctagggactgacatatttttaagatgtgggttccatt 380
Query: 176 gcctgcagcacaaatgaaaaatgtacttaagattcacagtcacaacaccaagcgtgcttt 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcctgcagcacaaatgaaaaatgtacttaagattcacagtcacaacaccaagcgtgcttt 440
Query: 236 cctggctgtgtgtatgctgactgtatgatcctgatgccgtaggggtgcgttctcctcagt 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctggctgtgtgtatgctgactgtatgatcctgatgccgtaggggtgcgttctcctcagt 500
Query: 296 catgcagcgggacagccgtgttcactcagtgtgtctatcttctgtattttatgcccatgt 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catgcagcgggacagccgtgttcactcagtgtgtctatcttctgtattttatgcccatgt 560
Query: 356 atcatttgaactttgatcactcatcataggtgatatcaatgatatttattagtatttgtt 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atcatttgaactttgatcactcatcataggtgatatcaatgatatttattagtatttgtt 620
Query: 416 ataaaactgtatttgtttcta 436
|||||||||||||||||||||
Sbjct: 621 ataaaactgtatttgtttcta 641
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 841
Length adjustment: 9
Effective length of query: 427
Effective length of database: 832
Effective search space: 355264
Effective search space used: 355264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
