Query= MSMg01no375_h01.b1 MSMg01no375_h01.b1 CHROMAT_FILE:
MSMg01no375_h01.b1 PHD_FILE: MSMg01no375_h01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:02 2005
(444 letters)
>mm_chr9_69753178_69754020
Length = 843
Score = 716 bits (370), Expect = 0.0
Identities = 409/422 (96%), Gaps = 1/422 (0%)
Strand = Plus / Plus
Query: 23 gaattctctgctgatcctcgagggtcatcaaaagaccgtttgaggattgttagtggttca 82
|||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 223 gaattctctgctgaggctcgagggtcatcaaaagactgtttgagggttgttagtggttca 282
Query: 83 tcctttcagggtgtccttagtaatgttcacaaatgaaaccccctacttctgggctggatg 142
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tcgtttcagggtgtccttagtaatgttcacaaatgaaaccccctacttctgggctggatg 342
Query: 143 tatgcagaacttcacaatctaactaataatgcctgttcattcttccctttgcaggcagag 202
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 343 tatgcagaacttcacaatctaactaataatgcctgttcattcttccctttgtaggcagag 402
Query: 203 ataggttatagattcaaggtcagaaaaaaaagatggtaaatatgaactcctccttcactt 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 403 ataggttatagattcaaggtcagaaaaaaaagatggtaaatatgaactcctcctttactt 462
Query: 263 ctggtctcctgagaggaatacacttccccatcctttggatttttatttctttattttgtg 322
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 463 ctggtctcctgagaggaatacacttccccatcctt-ggatttttatttctttattttgtg 521
Query: 323 tatgtgaatatactatagtggtatagatggttgtgagccttcatgtggttgttgggaatt 382
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tatgtgaatatactatagcggtatagatggttgtgagccttcatgtggttgttgggaatt 581
Query: 383 gaatttttaggactgtcgcttgctctggtcaacctcactcacccccgtcaactctgctgg 442
|||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||
Sbjct: 582 gaatttttaggactgtcgcttgctctggtcaaccccacttgcccctgtcaactctgctgg 641
Query: 443 ct 444
||
Sbjct: 642 ct 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 843
Length adjustment: 10
Effective length of query: 434
Effective length of database: 833
Effective search space: 361522
Effective search space used: 361522
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no375_h01.g1 MSMg01no375_h01.g1 CHROMAT_FILE:
MSMg01no375_h01.g1 PHD_FILE: MSMg01no375_h01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:02 2005
(359 letters)
>mm_chr9_69873226_69873984
Length = 759
Score = 667 bits (345), Expect = 0.0
Identities = 354/357 (99%)
Strand = Plus / Minus
Query: 1 atgttgggcattccattccagttagctgttcatttactctagtgacctgcaatgaaaata 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 427 atgttgggcattccattccagttagctgtccatttactctagtgacctgcaatgaaaata 368
Query: 61 tgtcctctcagaggccactcacccagcttctgagcaaaaccttaagtactatcacacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tgtcctctcagaggccactcacccagcttctgagcaaaaccttaagtactatcacacaca 308
Query: 121 gttgtatgtagaagagaaatctggactgaggcacactacacacttactctcttactcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gttgtatgtagaagagaaatctggactgaggcacactacacacttactctcttactcttt 248
Query: 181 tcttagcctgtgtgctgccttacaagaagctactaagcaattaggaagggcctgaagaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tcttagcctgtgtgctgccttacaagaagctactaagcaattaggaagggcctgaagaga 188
Query: 241 cctcaggaggtaaagtgcttattgcctaataaacatgaggacccacttgacccccaaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 cctcaggaggtaaagtgcttattgcctaataaacatgaggacccacttgacccccaaatc 128
Query: 301 tacttaacaaggcagctgtggtagagtacacctgtaatcttagcactagaagagtag 357
||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 127 tacttaacaagccagctgtggtagagtacacctgtaatctcagcactagaagagtag 71
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 759
Length adjustment: 9
Effective length of query: 350
Effective length of database: 750
Effective search space: 262500
Effective search space used: 262500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
