Query= MSMg01no376_f06.b1 MSMg01no376_f06.b1 CHROMAT_FILE:
MSMg01no376_f06.b1 PHD_FILE: MSMg01no376_f06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:12 2005
(529 letters)
>mm_chr9_43802202_43803132
Length = 931
Score = 561 bits (290), Expect = e-164
Identities = 306/312 (98%), Gaps = 2/312 (0%)
Strand = Plus / Minus
Query: 220 gagagcttgctgagcaagccatggggagcaagctagtaagcagcactcctccgcgacctc 279
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 931 gagagcttgctgagcaagccatggggagcaagctagtaagcagcactcctccgtgacctc 872
Query: 280 tgcatctgctcctgtcctgtgtgagctctgctttgaatgatgaccagttctatggaactg 339
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 tgcatctgctcctgtcctgcgtgagctctgctttgaatgatgaccagttctatggaactg 812
Query: 340 tgagtaaaattaaccctttcctttctgacttgcttctgttcatagtgtttcatcacagcc 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 tgagtaaaattaaccctttcctttctgacttgcttctgttcatagtgtttcatcacagcc 752
Query: 400 atagaaaccctaacaaagacgtaaacccaatcttt--aaaaaaaaaactggaataaatta 457
| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 751 acagaaaccctaacaaagacgtaaacccaatctttaaaaaaaaaaaactggaataaatta 692
Query: 458 aaagatattcttgtagagggagagagcaactatggttatgagtctctggagttgcacaaa 517
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 aaagatattcttggagagggagagagcaactatggttatgagtctctggagttgcacaaa 632
Query: 518 gaggcaagatgt 529
||||||||||||
Sbjct: 631 gaggcaagatgt 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 931
Length adjustment: 10
Effective length of query: 519
Effective length of database: 921
Effective search space: 477999
Effective search space used: 477999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_f06.g1 MSMg01no376_f06.g1 CHROMAT_FILE:
MSMg01no376_f06.g1 PHD_FILE: MSMg01no376_f06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:12 2005
(299 letters)
>mm_chr9_43623469_43624167
Length = 699
Score = 507 bits (262), Expect = e-148
Identities = 268/270 (99%)
Strand = Plus / Plus
Query: 1 aaaatatcccaggagaacacgaggataggtctcaacttctgctttactttatcggaactc 60
|||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 201 aaaatatcccaggagaacacgaggatgggtctctacttctgctttactttatcggaactc 260
Query: 61 ttgagtaagagttagtccattgtaattcttaaactcctgcatttgccaagggtaaagtgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgagtaagagttagtccattgtaattcttaaactcctgcatttgccaagggtaaagtgc 320
Query: 121 tcagatcgtctgtcagggtcagctccacgtgcacacatgatccccaccaagacagaggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcagatcgtctgtcagggtcagctccacgtgcacacatgatccccaccaagacagaggct 380
Query: 181 cacacatcacaccttcaggcaagaccctcctctggagccattggcccttttcttacagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacacatcacaccttcaggcaagaccctcctctggagccattggcccttttcttacagtt 440
Query: 241 ttgaaagatttattttattattattattat 270
||||||||||||||||||||||||||||||
Sbjct: 441 ttgaaagatttattttattattattattat 470
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 699
Length adjustment: 9
Effective length of query: 290
Effective length of database: 690
Effective search space: 200100
Effective search space used: 200100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
