Query= MSMg01no376_p05.b1 MSMg01no376_p05.b1 CHROMAT_FILE:
MSMg01no376_p05.b1 PHD_FILE: MSMg01no376_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:58 2005
(594 letters)
>mm_chr9_91835262_91836253
Length = 992
Score = 982 bits (508), Expect = 0.0
Identities = 569/590 (96%), Gaps = 6/590 (1%)
Strand = Plus / Minus
Query: 5 gaattccagta-ggtcacccttgttccccagcagatggtacactgagattcaccacacca 63
||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 gaattccagtagggt-acccttgttccccagcagatggtacactgagattcaccacacca 732
Query: 64 ttacgtttaatgggttggaattcatttggatttcttgatgttctctctgtcctccttgcc 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 ttacgtttaatgggttggaattcatttggatttcttgatgttctctctgtcctccttgct 672
Query: 124 gtcgcaatgctgcccatgttcctggctacatatgatttgagagagaatgtttgaagaaga 183
|| |||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 671 gttgcaatgctgcccgtgttcctggttacatatgatttgagagag--tgtttgaagaaga 614
Query: 184 aaaatccctttattattcataaatgagtgttttatatcaaagtttaaagtgtgtatgtat 243
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 613 aaaatccctttattattcataaatgagtgttttatgtcaaagtttaaagtgtgtatgtat 554
Query: 244 tgtgtgctcttggaggaaagagtgattaatgaatattcagcattatagattcatacattc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tgtgtgctcttggaggaaagagtgattaatgaatattcagcattatagattcatacattc 494
Query: 304 aatacattcaaaggtattttaaaacatggaaatggcttattgact-atagctgtgctact 362
||||||||||||||||||||||||||||||||| ||| ||||| | ||||| |||| ||
Sbjct: 493 aatacattcaaaggtattttaaaacatggaaattgctgattga-tgatagcactgcttct 435
Query: 363 ggggaggactcatttgaaaggcttgaagaaagtttccaagccagaccatggagaatgagg 422
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 434 ggggaggactcatttgaaaggcttgaagaaagtttccacgccagaccatggagaatgagg 375
Query: 423 ctaaacatctataatagcaaccacaaagctctttatcatgagaagaggaagatgaacaga 482
||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 374 ctaaacatctacaatagcaaccacaaaactctttatcatgagaagaggaagatgcacaga 315
Query: 483 gcatgcatcttacttttattagagcagaggtgctcacgattatttctgttttcacaaatt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gcatgcatcttacttttattagagcagaggtgctcacgattatttctgttttcacaaatt 255
Query: 543 tagaaagtatttggctcatcaattgatctctagacttctgaatcccatcc 592
||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tagaaagtattgggctcatcaattgatctctagacttctgaatcccatcc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 992
Length adjustment: 10
Effective length of query: 584
Effective length of database: 982
Effective search space: 573488
Effective search space used: 573488
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_p05.g1 MSMg01no376_p05.g1 CHROMAT_FILE:
MSMg01no376_p05.g1 PHD_FILE: MSMg01no376_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:58 2005
(591 letters)
>mm_chr9_91786522_91787512
Length = 991
Score = 1116 bits (577), Expect = 0.0
Identities = 586/589 (99%)
Strand = Plus / Plus
Query: 1 attcctcactagaccttcacatttttctctattttaaaagatactccactaattattttc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcctcactagaccttcacatttttctctattttaaaagatactccactaattattttt 260
Query: 61 ttaataacatttataatgcacaaaaatacaacctaccatatttggaaatatgcaattaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaataacatttataatgcacaaaaatacaacctaccatatttggaaatatgcaattaaa 320
Query: 121 ataaactgaaaaatatcaaagaaaaagtagttaatttattcttaattcatatgtgtatac 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataaattgaaaaatatcaaagaaaaagtagttaatttattcttaattcatatgtgtatac 380
Query: 181 aaacatgcctgacttcatgagtaccatgtgtatgtaaaagcccatagaagctaaagagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaacatgcctgacttcatgagtaccatgtgtatgtaaaagcccatagaagctaaagagaa 440
Query: 241 catcaaattccctggaactagactgagttgtgaaccattcaacacaggtattgagaaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catcaaattccctggaactagactgagttgtgaaccattcaacacaggtattgagaaaca 500
Query: 301 aaccatgatcctctgcaaaagcaataaaggcccacccctgctccaagaactatttttaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaccatgatcctctgcaaaagcaataaaggcccacccctgctccaagaactatttttaat 560
Query: 361 gtgattcattgaactactaaagactctagcaagagggcatggagttagcggacacaccca 420
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 561 gtgattcattgaactactaaagactctagcgagagggcatggagttagcggacacaccca 620
Query: 421 cagtccccaaaggtctctccccgtgattttaggatcactggtgagtggaacacaacatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagtccccaaaggtctctccccgtgattttaggatcactggtgagtggaacacaacatca 680
Query: 481 attccaatccaattgagacgggcctgtgacagcaggaccaaggacaccagagccctttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 attccaatccaattgagacgggcctgtgacagcaggaccaaggacaccagagccctttct 740
Query: 541 gaccagaggctcgggttccttttgatcagttctggtttatcttggtttc 589
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaccagaggctcgggttccttttgatcagttctggtttatcttggtttc 789
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space: 569961
Effective search space used: 569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
