Query= MSMg01no379_b04.b1 MSMg01no379_b04.b1 CHROMAT_FILE:
MSMg01no379_b04.b1 PHD_FILE: MSMg01no379_b04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:44 2005
(561 letters)
>mm_chr9_101734787_101735747
Length = 961
Score = 1038 bits (537), Expect = 0.0
Identities = 552/557 (99%), Gaps = 2/557 (0%)
Strand = Plus / Minus
Query: 5 gaattcacaggcttacaaacactttctatatgcatgtatttaatggtcacaacttttgag 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 gaattcacaggcttaaaaacactttctatatgcatgtatttaatggtcacaacttttgag 836
Query: 65 ttaggtgttttaattatccccatttcatgaatgcagcaccagaggcagaagaaatcaagg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 ttaggtgttttaattatccccatttcatgaatgcagcaccagaggcagaagaaatcaagg 776
Query: 125 tggcctgctcacagtgcccccagaaggcaa-aggcattattcttcagcgtatccgttctt 183
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 775 tggcctgctcacagtgcccccagaaggcaata-gcattattcttcagcgtatccgttctt 717
Query: 184 tccagcatagtttgctttgtgagttttctttacaagccatgttaggattgattctcccat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 tccagcatagtttgctttgtgagttttctttacaagccatgttaggattgattctcccat 657
Query: 244 gtctcctttatcctaagatgatgccgatctcgtcttggtagcatcacagtgggagccaag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gtctcctttatcctaagatgatgccgatctcgtcttggtagcatcacagtgggagccaag 597
Query: 304 ccaacactcacagaagatcaatttgtgaaccaatataatttatctaaatttgtttggaat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ccaacactcacagaagatcaatttgtgaaccaatataatttatctaaatttgtttggaat 537
Query: 364 caatggggagtcctgttctgcaagcccatgaggaaaatggaatatagatcaacctctcta 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 536 caatggggagtcctgttctgcaagcccatgaggaaaatggaatatagatcaacctctcaa 477
Query: 424 gctgaaaattccagcccattgcccacataacttttagctgcattgataggaacatactgt 483
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 476 gctgaaaattccagcccattgcccacataacttttagccgcattgataggaacatactgt 417
Query: 484 ctgcatccaaaacccattgggaacaacttagctgtgccttgatattaatactaatggact 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ctgcatccaaaacccattgggaacaacttagctgtgccttgatattaatactaatggact 357
Query: 544 ttttgaatacttattat 560
|||||||||||||||||
Sbjct: 356 ttttgaatacttattat 340
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 961
Length adjustment: 10
Effective length of query: 551
Effective length of database: 951
Effective search space: 524001
Effective search space used: 524001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no379_b04.g1 MSMg01no379_b04.g1 CHROMAT_FILE:
MSMg01no379_b04.g1 PHD_FILE: MSMg01no379_b04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:44 2005
(395 letters)
>mm_chr9_101560187_101560980
Length = 794
Score = 741 bits (383), Expect = 0.0
Identities = 392/395 (99%), Gaps = 1/395 (0%)
Strand = Plus / Plus
Query: 1 tggggttggcctgttcatagagtaggattctgattaaaaaaaaatagagacagagttccc 60
||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 201 tggggttggcctgttcatagagtaggattctgattcaaaaaaa-tagagacagagttccc 259
Query: 61 aacagcttcaaaaactgcctatgtttccccttagggattattttttattgaaagaattgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aacagcttcaaaaactgcctatgtttccccttagggattattttttattgaaagaattgg 319
Query: 121 aacctgctttaagttctcacattcttataaaaacaaatcaaaaggaaacaaaacacagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aacctgctttaagttctcacattcttataaaaacaaatcaaaaggaaacaaaacacagca 379
Query: 181 tctaattcatcactggatccctctaggaaaggccccatgctgtcaacctggggaggagcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tctaattcatcactggatccctctaggaaaggccccatgctgtcaacctggggaggagcc 439
Query: 241 ctgctttgtctttcctggggaagttatctatatgctgagtgccaggtaatttagctgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctgctttgtctttcctggggaagttatctatatgctgagtgccaggtaatttagctgaaa 499
Query: 301 ttttacaagtgatgaaaggcagtttctattatggtccttgtttataaatgaaaaccaacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttttacaagtgatgaaaggcagtttctattatggtccttgtttataaatgaaaaccaacc 559
Query: 361 ttggaaatgttaacaattgttgtgttgttgactaa 395
||||||||||||||||||||| |||||||||||||
Sbjct: 560 ttggaaatgttaacaattgttttgttgttgactaa 594
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 794
Length adjustment: 9
Effective length of query: 386
Effective length of database: 785
Effective search space: 303010
Effective search space used: 303010
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
